Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000547069 |
Family | CBM43 |
Protein Properties | Length: 529 Molecular Weight: 57232.5 Isoelectric Point: 4.7843 |
Chromosome | Chromosome/Scaffold: 021996183 Start: 4307 End: 8507 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 370 | 451 | 9.6e-25 |
WCMXNPNAKDVSNLADKINYACTYADCTALEYGSSCNNLDANGNASYAFNMYYQVQDQDDQSCSFQGLATLTTQNISQGNCN | |||
GH17 | 26 | 347 | 0 |
LGVNWGTMATHELPPDTVIQILKDNGIPKVKLFDADESTMSALTGSGLEVMVAIPNDQLAVMTSYKRAKEWVRRNVTRYNFNGGVNIKYVAVGNEPFLSS YNGSFLNVTFPALQNIQNALNEAGVGDSVKATVPLNADVYDSPVDNPVPSAGRFRTDILQLMTEIVQFLDKNKAPFTINIYPFLSLYGNDGFPFNYAFFD GDTTPIVDTGTGIQYTNVFDANFDTLVSSLKAVGFGNMPIVVGEVGWPTDGDKNANVGNAFRFYNGLLTRLGTNKGTPLRTGYIEVYLFGLIDEDAKSIA PGSFERHWGIFSYDGQPKFPVD |
Full Sequence |
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Protein Sequence Length: 529 Download |
MERMMWVLVG VAVLCVYGGG GGVEGLGVNW GTMATHELPP DTVIQILKDN GIPKVKLFDA 60 DESTMSALTG SGLEVMVAIP NDQLAVMTSY KRAKEWVRRN VTRYNFNGGV NIKYVAVGNE 120 PFLSSYNGSF LNVTFPALQN IQNALNEAGV GDSVKATVPL NADVYDSPVD NPVPSAGRFR 180 TDILQLMTEI VQFLDKNKAP FTINIYPFLS LYGNDGFPFN YAFFDGDTTP IVDTGTGIQY 240 TNVFDANFDT LVSSLKAVGF GNMPIVVGEV GWPTDGDKNA NVGNAFRFYN GLLTRLGTNK 300 GTPLRTGYIE VYLFGLIDED AKSIAPGSFE RHWGIFSYDG QPKFPVDLSG QGQNKLLVPA 360 KNVLYLSKKW CMXNPNAKDV SNLADKINYA CTYADCTALE YGSSCNNLDA NGNASYAFNM 420 YYQVQDQDDQ SCSFQGLATL TTQNISQGNC NFIIQMATTS SAFSLRPSAA AASLKRTSSQ 480 LTSITPPPPA SRTATVPPQL TPQDTLMVKS LGPSPNTRVS MLFTYCAA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-6 | 255 | 339 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 5.0e-18 | 369 | 439 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-31 | 369 | 452 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-69 | 39 | 347 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN09816.1 | 0 | 4 | 461 | 9 | 459 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
RefSeq | NP_179534.1 | 0 | 23 | 462 | 18 | 454 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277003.1 | 0 | 1 | 456 | 1 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319699.1 | 0 | 20 | 456 | 17 | 453 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525445.1 | 0 | 23 | 468 | 20 | 464 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 26 | 349 | 2 | 316 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 3f55_C | 0 | 26 | 349 | 2 | 316 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 3f55_B | 0 | 26 | 349 | 2 | 316 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 3f55_A | 0 | 26 | 349 | 2 | 316 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 3em5_D | 0 | 26 | 349 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |