Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000646125 |
Family | CBM43 |
Protein Properties | Length: 466 Molecular Weight: 49447.4 Isoelectric Point: 4.7896 |
Chromosome | Chromosome/Scaffold: 000964225 Start: 15914 End: 17779 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 377 | 460 | 7.6e-33 |
WCVANAKAGEEKLQAALDYACGEGGADCRPIQEGSTCFTPNTLEAHASYAFNSFYQKRARGTGTCNFGGAAYVVAQPPKYGTCE | |||
GH17 | 28 | 344 | 0 |
VGINYGRIADNLPPPEKVVALLKSQGINKVKLYDTDATVLTALANSGISVVVALPNELLSSAASDPSFADKWVQSNISHYHPKTQIEAIAVGNEVFVDPN NTTQFLVPAMKNIQSSLVKYNLSSIKLSSPIALSALNSSYPPSAGAFNPDLIEPVIKPFLEFLTQTSSYLMINAYPFFAYESTSDKISLDYALFRTNPGN PDSGNGLKYYSLLEAQIDAVXAAMSAVGHGDVKVVVTETGWPSKGDENEIGSGQANAAAYNGNLVKRILTGGGTPLKPKDPLNVYLFALFNEDQKPGPTS ERNYGLFYPDEKKVYDI |
Full Sequence |
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Protein Sequence Length: 466 Download |
MATFTFPLFL SLLLPIFAFA ASAETGTVGI NYGRIADNLP PPEKVVALLK SQGINKVKLY 60 DTDATVLTAL ANSGISVVVA LPNELLSSAA SDPSFADKWV QSNISHYHPK TQIEAIAVGN 120 EVFVDPNNTT QFLVPAMKNI QSSLVKYNLS SIKLSSPIAL SALNSSYPPS AGAFNPDLIE 180 PVIKPFLEFL TQTSSYLMIN AYPFFAYEST SDKISLDYAL FRTNPGNPDS GNGLKYYSLL 240 EAQIDAVXAA MSAVGHGDVK VVVTETGWPS KGDENEIGSG QANAAAYNGN LVKRILTGGG 300 TPLKPKDPLN VYLFALFNED QKPGPTSERN YGLFYPDEKK VYDIALTAAG LSGDQSSPAN 360 ESKVQVPTAS PSAGSTWCVA NAKAGEEKLQ AALDYACGEG GADCRPIQEG STCFTPNTLE 420 AHASYAFNSF YQKRARGTGT CNFGGAAYVV AQPPKYGTCE FPTGY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-7 | 47 | 337 | 298 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-22 | 376 | 448 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-37 | 376 | 461 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-101 | 28 | 344 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL77689.1 | 0 | 23 | 465 | 22 | 460 | AT5g55180/MCO15_13 [Arabidopsis thaliana] |
GenBank | AAM66024.1 | 0 | 23 | 465 | 22 | 460 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_568822.1 | 0 | 23 | 465 | 22 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002278044.1 | 0 | 1 | 465 | 1 | 471 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002529472.1 | 0 | 25 | 465 | 28 | 472 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 28 | 344 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 28 | 344 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 28 | 346 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 28 | 344 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 28 | 344 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |