Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000660874 |
Family | CBM43 |
Protein Properties | Length: 481 Molecular Weight: 52255 Isoelectric Point: 6.5994 |
Chromosome | Chromosome/Scaffold: 003232239 Start: 7953 End: 10071 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 390 | 473 | 8.2e-33 |
WCVANGEAGKEKLQAGLDYACGEGGADCHQIQPGSACYDPNTLEAHASYAFNSYYQKKARGVGTCYFGGAAYVVSQPPKFGKCE | |||
GH17 | 33 | 352 | 0 |
VGVNYGRIADNLPSAYKVVQLLKSQGLERVKVFDSDPAVLRALAGSDIKVTVDLPNELLSSAAKSQSFATNWVQRNVVAYHPNTQIEAIGVGNEVFVDTH HTTKFLISAMKNIHTALVHFKLESSIKVSSPIALSALQNSYPSSAGSFRPELVEPVFKPMLEFLRQTGSYLMVNCYPYFAYESNSDVIPLDYALFRENPG VVDAGNGLRYFNLFDAQIDAVFAAMSALKYDDINMVVSETGWPSKGDSVEVGASVENAAAYNGNLVRRILTGGGTPLRPKADLTVYLFALFNEDKKFGPT SERNYGLFFPNERKVYDIPF |
Full Sequence |
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Protein Sequence Length: 481 Download |
MLYFSKNQSM ERHVIAVLLL LSVFSSLADA ASVGVNYGRI ADNLPSAYKV VQLLKSQGLE 60 RVKVFDSDPA VLRALAGSDI KVTVDLPNEL LSSAAKSQSF ATNWVQRNVV AYHPNTQIEA 120 IGVGNEVFVD THHTTKFLIS AMKNIHTALV HFKLESSIKV SSPIALSALQ NSYPSSAGSF 180 RPELVEPVFK PMLEFLRQTG SYLMVNCYPY FAYESNSDVI PLDYALFREN PGVVDAGNGL 240 RYFNLFDAQI DAVFAAMSAL KYDDINMVVS ETGWPSKGDS VEVGASVENA AAYNGNLVRR 300 ILTGGGTPLR PKADLTVYLF ALFNEDKKFG PTSERNYGLF FPNERKVYDI PFTVEGLKNY 360 HDRRSPVSGN QQVTAPVNGD VSKSLTGSTW CVANGEAGKE KLQAGLDYAC GEGGADCHQI 420 QPGSACYDPN TLEAHASYAF NSYYQKKARG VGTCYFGGAA YVVSQPPKFG KCELPTGYGN 480 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK13498 | PRK13498 | 0.007 | 64 | 149 | 106 | + chemoreceptor glutamine deamidase CheD; Provisional | ||
COG5309 | COG5309 | 0.0002 | 226 | 328 | 119 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-23 | 389 | 461 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-38 | 389 | 472 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-105 | 34 | 352 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_178637.2 | 0 | 29 | 478 | 21 | 472 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002274828.1 | 0 | 10 | 478 | 1 | 471 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302861.1 | 0 | 10 | 478 | 1 | 470 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002333242.1 | 0 | 26 | 478 | 17 | 470 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525335.1 | 0 | 28 | 467 | 19 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 33 | 352 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 33 | 353 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 33 | 353 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 33 | 353 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 33 | 353 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |