y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000754160 |
Family | CBM43 |
Protein Properties | Length: 592 Molecular Weight: 63559.2 Isoelectric Point: 8.0905 |
Chromosome | Chromosome/Scaffold: 003996188 Start: 4333 End: 7874 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 393 | 474 | 1.4e-32 |
WCVPRSDASDAALQKNIDFVCSSGVDCKPIQGGGPCFQPNTVKSHAAYVMNAYYQANGPQDSNCDFKHTGVVTTTDPSYDAC | |||
GH17 | 29 | 342 | 0 |
IGVNYGTIADNLPPPSKVATFLKTKTTIDRVKIFDANPDILRAFAGTNIAVTVTVGNGDVPALAKLSAAQSWVADNILPFHPRTTINRIAVGNEILATSD KDLIAHLLPAMKSLHSALELVNISSIQVGTPNSLGILAPNTGPPSEGRFRTGYDRVVFTPMLDFHRQTKSPFLINPYPFFGSVPETLNYALFKPNGGVFD NATGMNYTNMFDAQMDAVYTAMKKVGYEDVDVVVAETGWPSVGDPTQPDATVDNAASYNGNLIKHVSSGKGTPLMPNRTFETYIFALFNENLKPSKSEQN YGLFKPDFNPVYDV |
Full Sequence |
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Protein Sequence Length: 592 Download |
MEPPLKLSLL PLLLFSACHV ILHTTAYSIG VNYGTIADNL PPPSKVATFL KTKTTIDRVK 60 IFDANPDILR AFAGTNIAVT VTVGNGDVPA LAKLSAAQSW VADNILPFHP RTTINRIAVG 120 NEILATSDKD LIAHLLPAMK SLHSALELVN ISSIQVGTPN SLGILAPNTG PPSEGRFRTG 180 YDRVVFTPML DFHRQTKSPF LINPYPFFGS VPETLNYALF KPNGGVFDNA TGMNYTNMFD 240 AQMDAVYTAM KKVGYEDVDV VVAETGWPSV GDPTQPDATV DNAASYNGNL IKHVSSGKGT 300 PLMPNRTFET YIFALFNENL KPSKSEQNYG LFKPDFNPVY DVGILRNQQA AAPKSSVAAG 360 PKSGVAAGPK SGVAEGPTPG GAQAPSPSAG KRWCVPRSDA SDAALQKNID FVCSSGVDCK 420 PIQGGGPCFQ PNTVKSHAAY VMNAYYQANG PQDSNCDFKH TGVVTTTDPS YDACTYPYKA 480 EKSEKTVAGG SIKMKCDRMA GKEIIAAHCE SKAIPSPLEQ LQRELLLEGQ TSEQGLIARG 540 RKSSVGWQGS PSSPERQVRR FSPAREHEVD LTLDACFNVF FIRPRTPPIS R* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.008 | 258 | 335 | 82 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-23 | 392 | 463 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-41 | 393 | 476 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-93 | 29 | 342 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95730.1 | 0 | 12 | 476 | 13 | 447 | unknown [Populus trichocarpa] |
RefSeq | XP_002283647.1 | 0 | 5 | 476 | 4 | 445 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002298356.1 | 0 | 19 | 470 | 17 | 447 | glycoside hydrolase [Populus trichocarpa] |
RefSeq | XP_002312097.1 | 0 | 12 | 476 | 13 | 447 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532848.1 | 0 | 24 | 494 | 20 | 463 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 342 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 29 | 344 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 29 | 344 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 29 | 344 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 29 | 344 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |