Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000785544 |
Family | CBM43 |
Protein Properties | Length: 485 Molecular Weight: 52895 Isoelectric Point: 4.6857 |
Chromosome | Chromosome/Scaffold: 006613339 Start: 32053 End: 34188 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 367 | 448 | 9.7e-25 |
WCMFNPNAKDVSKLADNINYACTFSDCTALEYGSSCNNLDANGNASYAFNMYYQVQNQDDLSCNFQGLATLTTQNISQGNCN | |||
GH17 | 23 | 344 | 0 |
LGVNWGTMATHKLPPETVVQMLKDNGIQKVKLFDAEESTMSALAGSGLEVMVAIPNDQLAVMTSYKRAKEWVRRNVTRYNFNGGVNIKYVAVGNEPFLTS YNGSFLNVTFPALQNIQNALNEAGVGDSVKATVPLNADVYNSPENNPVPSAGRFRTDILQLMTEIVQFLDKNQAPFSINIYPFLSLYGNDDFPFNYAFFD GDTNPIVDAGTGIQYTNVFDANFDTLVSSLKAVGFGNMPIVVGEVGWPTDGDKNANAGNALRFYNGLLPRLGTNRGTPLRPGYIEVYLFGLIDEDAKSIA PGSFERHWGIFRYDGQPKFPVD |
Full Sequence |
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Protein Sequence Length: 485 Download |
MERMMWVLVA VAVLCVCSGV EGLGVNWGTM ATHKLPPETV VQMLKDNGIQ KVKLFDAEES 60 TMSALAGSGL EVMVAIPNDQ LAVMTSYKRA KEWVRRNVTR YNFNGGVNIK YVAVGNEPFL 120 TSYNGSFLNV TFPALQNIQN ALNEAGVGDS VKATVPLNAD VYNSPENNPV PSAGRFRTDI 180 LQLMTEIVQF LDKNQAPFSI NIYPFLSLYG NDDFPFNYAF FDGDTNPIVD AGTGIQYTNV 240 FDANFDTLVS SLKAVGFGNM PIVVGEVGWP TDGDKNANAG NALRFYNGLL PRLGTNRGTP 300 LRPGYIEVYL FGLIDEDAKS IAPGSFERHW GIFRYDGQPK FPVDLSGQGQ NKLLVPAKNV 360 QYLSKKWCMF NPNAKDVSKL ADNINYACTF SDCTALEYGS SCNNLDANGN ASYAFNMYYQ 420 VQNQDDLSCN FQGLATLTTQ NISQGNCNFI IQIATSSAFS LRPSSSSSVL VALLAMLLSA 480 LLLL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-6 | 252 | 336 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-18 | 366 | 436 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-32 | 366 | 449 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 8.0e-73 | 23 | 344 | 325 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN09816.1 | 0 | 6 | 458 | 5 | 459 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
RefSeq | NP_179534.1 | 0 | 20 | 460 | 18 | 455 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002277003.1 | 0 | 1 | 453 | 1 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319699.1 | 0 | 18 | 478 | 18 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525445.1 | 0 | 18 | 464 | 18 | 464 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 23 | 346 | 2 | 316 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3f55_C | 0 | 23 | 346 | 2 | 316 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3f55_B | 0 | 23 | 346 | 2 | 316 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3f55_A | 0 | 23 | 346 | 2 | 316 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 3em5_D | 0 | 23 | 346 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |