| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000893827 |
| Family | CBM43 |
| Protein Properties | Length: 478 Molecular Weight: 52748.6 Isoelectric Point: 8.2298 |
| Chromosome | Chromosome/Scaffold: 002947526 Start: 9704 End: 11249 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 364 | 443 | 4.3e-23 |
| WCVLNSDVKNMSQTDAELNYACAGSDCTSLGTGRSCDLDQHGKVSYAFNSYFQNRDQDVRTCNFNGMATITKNNPSVGDC | |||
| GH17 | 24 | 340 | 0 |
| LGVNWGAMASHQLPPKNVVQMLKDNGIKKVKLFDAEPSTLNALAGSGIQVMVGIPNEKLEKLADSYSEAQQWVKENVTKWLGSVSISYVAVGNEPYLTSY NGSYVKTTYPALKNIQKAIREXGAGDKVKATVPFNADVYESSSSKPSDGRFRKDIKNNMVEILRHLRDNKSPFVVNIYPFLSLYQSPDFPKEFAFFEGGS KPVSDNNIEYKNVFDANCDTLINALKKEGFGNMEIIIGEAGWPTDGDKNANIKNAKKFYDGLLKKLGKXEGTPLRKGKLEVYLFGLFDEDQKSIAPGDFE RHWGIFRYDGQPKFPMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 478 Download |
| MARAVFLVWV LSVILATTNL AQGLGVNWGA MASHQLPPKN VVQMLKDNGI KKVKLFDAEP 60 STLNALAGSG IQVMVGIPNE KLEKLADSYS EAQQWVKENV TKWLGSVSIS YVAVGNEPYL 120 TSYNGSYVKT TYPALKNIQK AIREXGAGDK VKATVPFNAD VYESSSSKPS DGRFRKDIKN 180 NMVEILRHLR DNKSPFVVNI YPFLSLYQSP DFPKEFAFFE GGSKPVSDNN IEYKNVFDAN 240 CDTLINALKK EGFGNMEIII GEAGWPTDGD KNANIKNAKK FYDGLLKKLG KXEGTPLRKG 300 KLEVYLFGLF DEDQKSIAPG DFERHWGIFR YDGQPKFPMD LSGKGNGDQM LKAVKGVEYL 360 EKQWCVLNSD VKNMSQTDAE LNYACAGSDC TSLGTGRSCD LDQHGKVSYA FNSYFQNRDQ 420 DVRTCNFNGM ATITKNNPSV GDCLFPVQIV NTGAPRHGAV GVAYAFSIFV GLLWMMI* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0807 | RibA | 0.0007 | 19 | 89 | 74 | + GTP cyclohydrolase II [Coenzyme metabolism] | ||
| COG5309 | COG5309 | 7.0e-6 | 254 | 332 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 6.0e-13 | 363 | 432 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-24 | 363 | 445 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-76 | 24 | 340 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62816.1 | 0 | 1 | 453 | 1 | 458 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002275701.1 | 0 | 1 | 453 | 1 | 458 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310612.1 | 0 | 1 | 473 | 1 | 478 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002438620.1 | 0 | 15 | 452 | 32 | 469 | hypothetical protein SORBIDRAFT_10g022940 [Sorghum bicolor] |
| RefSeq | XP_002530257.1 | 0 | 1 | 453 | 1 | 459 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 24 | 342 | 2 | 316 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 3f55_C | 0 | 24 | 342 | 2 | 316 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 3f55_B | 0 | 24 | 342 | 2 | 316 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 3f55_A | 0 | 24 | 342 | 2 | 316 | A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase |
| PDB | 3em5_D | 0 | 24 | 342 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
