| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr4g074960.1 |
| Family | CBM49 |
| Protein Properties | Length: 663 Molecular Weight: 73252.7 Isoelectric Point: 7.167 |
| Chromosome | Chromosome/Scaffold: 4 Start: 23938252 End: 23941929 |
| Description | glycosyl hydrolase 9C1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM49 | 571 | 649 | 7.9e-30 |
| DFLHSISSSWTVGTTTYYRHKVIIKNTSAKPVSDLKLVVENLSGSVWGLSPTGEKNTYELPQWHKVLNPGSECMFVYVQ | |||
| GH9 | 28 | 515 | 0 |
| NYGDALDKSLMFFEAQRSGKLPLQQQRVKWRADSGLKDGIQQGVDLVGGYYDAGDHVKFGLPMAYSVTMLAWGAIEFSKEITGLNQMGHTLWAIKWGTDY FIKAHPQPNVLWGQVGDGTSDHYCWERAEDMTTSRTAYKIDEQHPGSDLAGETAAALASAAIAFRPYNSSYSNLLLVHAKQLFTFADRYRGLYDESISSA KQFYDSSGYSVSKHFSIISLLLLASDPSKLTSLVKDELLWAAAWLHRATGDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQTLLSKVLLEGKAGPY ASTLKQYQAKADYFSCACLQKNDGYNVQKTPGGLLYLHEWNNMQYASSAAFLLAVYSNYLSAAKAQLNCPEGQIQPQELLNFVKSQADYILGKNPEDMSY LIGYGPKYPIHVHHRGSSIASVFSLHSEVGCAQGFDAWYNRIEPNPNVIHGGLVGGPDRNDDYTDDRSNYEQSEPTLSGSAPLVGIFA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 663 Download |
| MKNLNISLCM VMAVVLVGLV GSVPLGFNYG DALDKSLMFF EAQRSGKLPL QQQRVKWRAD 60 SGLKDGIQQG VDLVGGYYDA GDHVKFGLPM AYSVTMLAWG AIEFSKEITG LNQMGHTLWA 120 IKWGTDYFIK AHPQPNVLWG QVGDGTSDHY CWERAEDMTT SRTAYKIDEQ HPGSDLAGET 180 AAALASAAIA FRPYNSSYSN LLLVHAKQLF TFADRYRGLY DESISSAKQF YDSSGYSVSK 240 HFSIISLLLL ASDPSKLTSL VKDELLWAAA WLHRATGDEY YLKYVVDNAV YMGGTGWAVK 300 EFSWDNKYAG VQTLLSKVLL EGKAGPYAST LKQYQAKADY FSCACLQKND GYNVQKTPGG 360 LLYLHEWNNM QYASSAAFLL AVYSNYLSAA KAQLNCPEGQ IQPQELLNFV KSQADYILGK 420 NPEDMSYLIG YGPKYPIHVH HRGSSIASVF SLHSEVGCAQ GFDAWYNRIE PNPNVIHGGL 480 VGGPDRNDDY TDDRSNYEQS EPTLSGSAPL VGIFAKLQSS YGNIGSYHKY NESPLPQQKT 540 PSTTNLYNNP SKKTNLYKEP TPKTPQGAPV DFLHSISSSW TVGTTTYYRH KVIIKNTSAK 600 PVSDLKLVVE NLSGSVWGLS PTGEKNTYEL PQWHKVLNPG SECMFVYVQG GPQAKILIQS 660 FH* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 0 | 27 | 662 | 636 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 28 | 661 | 636 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 27 | 517 | 493 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 28 | 517 | 490 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 28 | 515 | 490 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27137.1 | 0 | 9 | 662 | 8 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175323.1 | 0 | 27 | 662 | 29 | 627 | AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002277177.1 | 0 | 33 | 662 | 1 | 575 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310080.1 | 0 | 26 | 662 | 25 | 611 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002527135.1 | 0 | 1 | 662 | 1 | 620 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 25 | 517 | 1 | 428 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
| PDB | 1ksc_A | 0 | 25 | 517 | 1 | 428 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
| PDB | 1ks8_A | 0 | 25 | 517 | 1 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 27 | 524 | 24 | 466 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 27 | 522 | 4 | 445 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
