| Basic Information | |
|---|---|
| Species | Medicago truncatula |
| Cazyme ID | Medtr4g133150.1 |
| Family | AA1 |
| Protein Properties | Length: 232 Molecular Weight: 25593.1 Isoelectric Point: 9.5309 |
| Chromosome | Chromosome/Scaffold: 4 Start: 47160507 End: 47162934 |
| Description | SKU5 similar 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 26 | 231 | 1.8e-40 |
| NCLITPRKNFTYTLQVKDQIGSYFYFPIWSRAHIQIPVPFPPSAGDFTILAGDWFKLGHRRLRRVLENGHNLPFPDCLLINGRGWNGNTFTVNQGKTYGF RISNVGLAASINFIIQGHSLKLVEVEGSHTLQNTYSSLDIHIGQSYSVLVTANQSVKDYYAVVSTLFTRVSGPAPLGPTLDFTSSVFQARTIRWNLTASG PRPNPQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 232 Download |
| MDTDSMILVS APLDKYDTHA GVSGTNCLIT PRKNFTYTLQ VKDQIGSYFY FPIWSRAHIQ 60 IPVPFPPSAG DFTILAGDWF KLGHRRLRRV LENGHNLPFP DCLLINGRGW NGNTFTVNQG 120 KTYGFRISNV GLAASINFII QGHSLKLVEV EGSHTLQNTY SSLDIHIGQS YSVLVTANQS 180 VKDYYAVVST LFTRVSGPAP LGPTLDFTSS VFQARTIRWN LTASGPRPNP Q* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02168 | PLN02168 | 5.0e-72 | 21 | 231 | 248 | + copper ion binding / pectinesterase | ||
| PLN02792 | PLN02792 | 5.0e-75 | 2 | 231 | 269 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 7.0e-79 | 21 | 231 | 248 | + copper ion binding / oxidoreductase | ||
| PLN02991 | PLN02991 | 2.0e-80 | 21 | 231 | 243 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 2.0e-84 | 21 | 231 | 243 | + oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95805.1 | 0 | 21 | 231 | 98 | 338 | unknown [Populus trichocarpa] |
| RefSeq | NP_193932.1 | 0 | 21 | 231 | 95 | 335 | sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002332613.1 | 0 | 21 | 231 | 98 | 338 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518462.1 | 0 | 21 | 231 | 96 | 336 | multicopper oxidase, putative [Ricinus communis] |
| RefSeq | XP_002524823.1 | 0 | 21 | 231 | 98 | 338 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4a2h_A | 0.00000000000004 | 27 | 210 | 85 | 295 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4a2g_A | 0.00000000000004 | 27 | 210 | 85 | 295 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4a2e_A | 0.00000000000004 | 27 | 210 | 85 | 295 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4a2d_A | 0.00000000000004 | 27 | 210 | 85 | 295 | A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5 |
| PDB | 4a2f_A | 0.00000000000004 | 27 | 210 | 85 | 295 | A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev |
| Hydropathy |
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