CAZyme Information

Basic Information
SpeciesMedicago truncatula
Cazyme IDMedtr8g076800.1
FamilyGH35
Protein PropertiesLength: 395 Molecular Weight: 45450.8 Isoelectric Point: 7.2952
ChromosomeChromosome/Scaffold: 8 Start: 21124963 End: 21129275
Descriptionbeta galactosidase 1
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH35601821.3e-22
  FQMQKFIEKIVDMMKAERLFESQGGPIIMSQIENECGPTEYEIGVSRYGYRTRYRSSVDHINTCNGFYCDYFYPNKDYKPKMWTEAWTGWFTEFGGPVPH
  RPAEDMAFSVARFIQKGGSLFTL
Full Sequence
Protein Sequence     Length: 395     Download
MESSTDTKYL QESPELVSVV TKLKKEVDVW KIGFRVLDSW IVTASNGNQH MEFIIGDAKF    60
QMQKFIEKIV DMMKAERLFE SQGGPIIMSQ IENECGPTEY EIGVSRYGYR TRYRSSVDHI    120
NTCNGFYCDY FYPNKDYKPK MWTEAWTGWF TEFGGPVPHR PAEDMAFSVA RFIQKGGSLF    180
TLRKYSAQLS LTAIVCSLGT LQSIDVTFVM EHNPNAWCIG WDMNLLAAAY VGIISSGLTY    240
YVQGIVMQKK GPVFVRMTTI FSNYYQCLCF IVNVMFDVRV AICTCLSRQG VKEFLTEINV    300
ISEVEHENLV KLYGCCVERN SRILVYNYLE NNRHYIVVCV FERYENIKQI FLICLFPILP    360
FLNSILNYVA KPWPIVGSLP EMIANRPTLK WIQN* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
smart00221STYKc5.0e-727733158+
smart00219TyrKc3.0e-727733672+
cd00192PTKc2.0e-727733158+
pfam01301Glyco_hydro_358.0e-3262179149+
PLN03059PLN030598.0e-5556185149+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004672protein kinase activity
GO:0005975carbohydrate metabolic process
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankABK96254.1056185151299unknown [Populus trichocarpa x Populus deltoides]
GenBankABN08398.1059187149296D-galactoside/L-rhamnose binding SUEL lectin; Galactose-binding like [Medicago truncatula]
GenBankACJ85203.1018028136137unknown [Medicago truncatula]
RefSeqXP_002327432.1056187144294predicted protein [Populus trichocarpa]
RefSeqXP_002329051.10218581283predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3ulz_A0.000728734667124A Chain A, The Crystal Structure Of Engineered Ospa
PDB3uim_A0.000728734667124A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation
PDB3tl8_H0.000828734675132B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_G0.000828734675132B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_D0.000828734675132B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
Transmembrane Domains
StartEnd
225247
252274
350369
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EV2612621151692810
CX181405164491910
GO917888151561870
EV192957143561790
EV261262521281791e-27