y
Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.001G014900.1 |
Family | CBM43 |
Protein Properties | Length: 474 Molecular Weight: 50198.7 Isoelectric Point: 4.6917 |
Chromosome | Chromosome/Scaffold: 01 Start: 1264657 End: 1267924 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 385 | 466 | 4.9e-32 |
WCVPKAGVSDAELQANLDYACGQGIDCVAIQQGGACFEPNTLLNHAAYAMNLLYQTAGRNPLTCDFSQTAMLSTNNPSYKSC | |||
GH17 | 27 | 344 | 0 |
IGVNYGQVADNLPPPAATAKLLQSTAIGKVRLYGTDPAIIQALANTGIGIVIGAANGDIPGLASDPNFAKTWVNTNVVPYYPASNIILVTVGNEVITSND TGLVNQMLPAIQNVQGALEAASLGGKVKVSTVHSMAVLRDSEPPSAGRFHPEYNTVLQGLLSFNNATGSPFTINPYPYFAYRSDPGRADNLAFCLFQPNA GRVDPNTNLKYMNMFDAQVDAVRSALDSLGFKNVEIVVAETGWPYKGDTSEAGPSLENAKAYNGNLIAHLRSMVGTPLMPGKSVDTYLFALYDEDLKPGD ASERAFGLFNPDQSMIYD |
Full Sequence |
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Protein Sequence Length: 474 Download |
MATSLAFLLQ FLPFFLIFNL ASSESFIGVN YGQVADNLPP PAATAKLLQS TAIGKVRLYG 60 TDPAIIQALA NTGIGIVIGA ANGDIPGLAS DPNFAKTWVN TNVVPYYPAS NIILVTVGNE 120 VITSNDTGLV NQMLPAIQNV QGALEAASLG GKVKVSTVHS MAVLRDSEPP SAGRFHPEYN 180 TVLQGLLSFN NATGSPFTIN PYPYFAYRSD PGRADNLAFC LFQPNAGRVD PNTNLKYMNM 240 FDAQVDAVRS ALDSLGFKNV EIVVAETGWP YKGDTSEAGP SLENAKAYNG NLIAHLRSMV 300 GTPLMPGKSV DTYLFALYDE DLKPGDASER AFGLFNPDQS MIYDAGLTKQ QQTNSPVPVS 360 APTTPDLSKS PVTPKPTKTN SSGTWCVPKA GVSDAELQAN LDYACGQGID CVAIQQGGAC 420 FEPNTLLNHA AYAMNLLYQT AGRNPLTCDF SQTAMLSTNN PSYKSCLYAG GNA* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-13 | 21 | 338 | 330 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-21 | 384 | 455 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-38 | 384 | 468 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-94 | 27 | 344 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 5 | 473 | 1 | 456 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 23 | 470 | 55 | 489 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002282736.1 | 0 | 4 | 471 | 8 | 463 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 18 | 472 | 19 | 459 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
RefSeq | XP_002510373.1 | 0 | 1 | 473 | 5 | 461 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 27 | 344 | 1 | 309 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 27 | 344 | 1 | 303 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 27 | 344 | 1 | 303 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 27 | 343 | 3 | 310 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 27 | 343 | 3 | 310 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |