Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.001G032300.2 |
Family | CBM22 |
Protein Properties | Length: 902 Molecular Weight: 99668.4 Isoelectric Point: 6.0506 |
Chromosome | Chromosome/Scaffold: 01 Start: 3121181 End: 3127238 |
Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM22 | 15 | 153 | 1.9e-29 |
NILLNHDFSSGLSSWHLNSCSGYVISAETGAQGGISRELSANYAVITDRKECWQGLEQDITDRISTGYTYTVLACVGVSSLSQGSSDVLATLKLEYHDSA TSYLFIGRTSVNKDSWQKLEGTFSLSTMPDRVVFYLEGP | |||
CBM22 | 187 | 323 | 6.6e-33 |
NIIINPQFDDGLNNWSGRGCKIMLHDSMNDGKIVPKSGKFFASATERTQNWNGIQQDITGRVQRKLAYEVTASVRIFGNNVSTADVRATLWVQAPDLKEQ YIGIANLQATDKDWVTMQGKFLLNGSPSKVVLYLEGP | |||
CBM22 | 358 | 499 | 5.60519e-45 |
NIIENSTLADGTNGWFPLGNCTLSVKTGSPHIVPPMARDSLGPSELLSGRYILVTNRTQTWMGPAQIITDKVKLFLTYQVSAWVRIVSGSSGPQNVNVAL GVDNEWVNGGQTEVSDNTWHEIGGSFRIEKQPSKVMVYVQGP | |||
GH10 | 556 | 827 | 0 |
RQTQNDFPIGTCISRSNIDNEDFVDFMVKHFNWAVFGNELKWYWTEPQQGNFNYKDADDLLSLCQKHNIQTRGHCIFWDVDGVVQQWIKSLNNNDLMTAI QNRLNGLLTRYKGKFNHYDVNNEMLHGSFFQDRLGKDIRANMFKTANQLDPSATLFVNDYHVEDGCDTRSCPDKYIHHILDLQEQGAPVGGIGIQGHIDS PIGPIVSSSLDKLGILGLPIWFTELDVSSINEYVRADDLEVMLREAMAHPAVEGIMLWGFWELFMSRDNAHL |
Full Sequence |
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Protein Sequence Length: 902 Download |
MAGNISDPSG SKGANILLNH DFSSGLSSWH LNSCSGYVIS AETGAQGGIS RELSANYAVI 60 TDRKECWQGL EQDITDRIST GYTYTVLACV GVSSLSQGSS DVLATLKLEY HDSATSYLFI 120 GRTSVNKDSW QKLEGTFSLS TMPDRVVFYL EGPAPGVDLL IRSVEINCST PNNNTTSTAC 180 VSAGDDNIII NPQFDDGLNN WSGRGCKIML HDSMNDGKIV PKSGKFFASA TERTQNWNGI 240 QQDITGRVQR KLAYEVTASV RIFGNNVSTA DVRATLWVQA PDLKEQYIGI ANLQATDKDW 300 VTMQGKFLLN GSPSKVVLYL EGPPPGTDIL LNNLVLKHAA KTPPSSPPDV KNVTFGVNII 360 ENSTLADGTN GWFPLGNCTL SVKTGSPHIV PPMARDSLGP SELLSGRYIL VTNRTQTWMG 420 PAQIITDKVK LFLTYQVSAW VRIVSGSSGP QNVNVALGVD NEWVNGGQTE VSDNTWHEIG 480 GSFRIEKQPS KVMVYVQGPA SGVDLMVAGL QIFPVDRHAR LRYLKIQTNK IRKRDVILKF 540 SGLDSGSYAN TSVQVRQTQN DFPIGTCISR SNIDNEDFVD FMVKHFNWAV FGNELKWYWT 600 EPQQGNFNYK DADDLLSLCQ KHNIQTRGHC IFWDVDGVVQ QWIKSLNNND LMTAIQNRLN 660 GLLTRYKGKF NHYDVNNEML HGSFFQDRLG KDIRANMFKT ANQLDPSATL FVNDYHVEDG 720 CDTRSCPDKY IHHILDLQEQ GAPVGGIGIQ GHIDSPIGPI VSSSLDKLGI LGLPIWFTEL 780 DVSSINEYVR ADDLEVMLRE AMAHPAVEGI MLWGFWELFM SRDNAHLVNA EGDINEAGKR 840 FLALKQEWLS HSRGHVDEQG QYNFRGFHGT YNVQVVTPSK KISKTFVLDK GDTPLVLSID 900 L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 7.0e-18 | 187 | 327 | 143 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
pfam02018 | CBM_4_9 | 7.0e-19 | 14 | 155 | 143 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 5.0e-34 | 556 | 815 | 282 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
smart00633 | Glyco_10 | 9.0e-78 | 595 | 841 | 268 | + Glycosyl hydrolase family 10. | ||
pfam00331 | Glyco_hydro_10 | 4.0e-78 | 560 | 845 | 306 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33301.1 | 0 | 4 | 901 | 19 | 915 | putative endo-1,4-beta-xylanase [Populus tremula x Populus tremuloides] |
RefSeq | XP_002283550.1 | 0 | 11 | 901 | 90 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301133.1 | 0 | 1 | 901 | 150 | 1049 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 15 | 507 | 2 | 479 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002301133.1 | 0 | 186 | 512 | 1 | 314 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xyz_B | 1e-29 | 564 | 815 | 39 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 1xyz_A | 1e-29 | 564 | 815 | 39 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
PDB | 1nq6_A | 1e-27 | 564 | 836 | 15 | 291 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1i1x_A | 2e-27 | 593 | 814 | 47 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 1i1w_A | 2e-27 | 593 | 814 | 47 | 268 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO789518 | 281 | 601 | 881 | 0 |
EX570690 | 295 | 608 | 902 | 0 |
EX570691 | 281 | 608 | 888 | 0 |
EB442796 | 298 | 385 | 682 | 0 |
HO789518 | 36 | 870 | 902 | 0.039 |
Sequence Alignments (This image is cropped. Click for full image.) |
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