Basic Information | |
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Species | Phaseolus vulgaris |
Cazyme ID | Phvul.002G168400.1 |
Family | GT35 |
Protein Properties | Length: 977 Molecular Weight: 111353 Isoelectric Point: 5.2699 |
Chromosome | Chromosome/Scaffold: 02 Start: 31098506 End: 31107502 |
Description | Glycosyl transferase, family 35 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 169 | 519 | 0 |
ALRKLGHNLEDVANKEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQHITRDGQVEVAENWLEMGNPWEILRNDVSYPVKFYGEVIPGP NGSKQWVGGENILAVAYDVPIPGYKTRTTINLRLWSTKVSQEEFDLLAFNSGDHAKAYAVLKNAEKICYVLYPGDESIEGKTLRLKQQYTLCSASLQDII ARFEKRSGKSVNWDTLPDKVVVQMNDTHPTLCIPELIRILMDVKGLSWEKSWNMTKRTVAYTNHTVLPEALEKWSLTLLQDLLPRHVGIIRMIDEELIHE IISEYGIDDLELLQERLKKMRILENIELPCSVMELLSTEETSTVDPVKEIH | |||
GT35 | 570 | 971 | 0 |
PKLPMMVRMANLCVAGGFSVNGVAAIHSEIVKVEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSKIITKWIGTEDWVTDLEKLAILRKFADNEDLQ LEWIEAKKINKIKVASFIKDKTGYVVNPSAMFDVQVKRIHEYKRQLLNIMGIVYRYKKMKEMSAEERKEIFVPRVCIFGGKAFATYVQAKRIVKFITDVG ATINCDPDIGDLLKVVFVPDYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFAMNGCIVIGTLDGANVEIREEVGEDNFFLFGARAEEIAGLRKERAE GKFVPDPRFEEVKAYVRSGVFGPYNYEELMGSLEGNEGYGRADYFLVGKDFPSYLECQEQVDKAYRDQKRWTKMSIMNTAGSYKFSSDRTIHEYARDIWR IE |
Full Sequence |
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Protein Sequence Length: 977 Download |
MAALPFSTTC SHSNSPLHHN SRSSFIGFSQ RNNLWQLLVI TKSISRRAIR KLSVKNVASD 60 EKQELKDPLT KRDTFHDFVP DSSSIASSIK FHAEFTSHFS PEKFELNKAF FATAESVRDS 120 LIINWNATND YYERKNVKLA YYMSMEYLQG RALLNAIGNL QLLGPYAEAL RKLGHNLEDV 180 ANKEPDAALG NGGLGRLASC FLDSLATLNY PAWGYGLRYK YGLFKQHITR DGQVEVAENW 240 LEMGNPWEIL RNDVSYPVKF YGEVIPGPNG SKQWVGGENI LAVAYDVPIP GYKTRTTINL 300 RLWSTKVSQE EFDLLAFNSG DHAKAYAVLK NAEKICYVLY PGDESIEGKT LRLKQQYTLC 360 SASLQDIIAR FEKRSGKSVN WDTLPDKVVV QMNDTHPTLC IPELIRILMD VKGLSWEKSW 420 NMTKRTVAYT NHTVLPEALE KWSLTLLQDL LPRHVGIIRM IDEELIHEII SEYGIDDLEL 480 LQERLKKMRI LENIELPCSV MELLSTEETS TVDPVKEIHV DDNDVKATEK EEEKDDDDEV 540 GEEEQEEDSD NPSIEEDTDN KVEMRFKVDP KLPMMVRMAN LCVAGGFSVN GVAAIHSEIV 600 KVEVFNEFYK LWPEKFQNKT NGVTPRRWIR FCNPDLSKII TKWIGTEDWV TDLEKLAILR 660 KFADNEDLQL EWIEAKKINK IKVASFIKDK TGYVVNPSAM FDVQVKRIHE YKRQLLNIMG 720 IVYRYKKMKE MSAEERKEIF VPRVCIFGGK AFATYVQAKR IVKFITDVGA TINCDPDIGD 780 LLKVVFVPDY NVSVAEMLIP GSELSQHIST AGMEASGTSN MKFAMNGCIV IGTLDGANVE 840 IREEVGEDNF FLFGARAEEI AGLRKERAEG KFVPDPRFEE VKAYVRSGVF GPYNYEELMG 900 SLEGNEGYGR ADYFLVGKDF PSYLECQEQV DKAYRDQKRW TKMSIMNTAG SYKFSSDRTI 960 HEYARDIWRI EPFELA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00343 | Phosphorylase | 3.0e-131 | 169 | 521 | 353 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
TIGR02093 | P_ylase | 6.0e-162 | 89 | 521 | 436 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 86 | 970 | 894 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
pfam00343 | Phosphorylase | 0 | 576 | 972 | 402 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
TIGR02093 | P_ylase | 0 | 575 | 970 | 401 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27267.1 | 0 | 1 | 973 | 1 | 930 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | P53535 | 0 | 58 | 975 | 54 | 973 | PHSL2_SOLTU RecName: Full=Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L-2; Flags: Precursor |
RefSeq | XP_002274575.1 | 0 | 1 | 973 | 1 | 978 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316098.1 | 0 | 1 | 975 | 1 | 952 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512108.1 | 0 | 1 | 975 | 1 | 972 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1z8d_A | 0 | 576 | 972 | 440 | 830 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 1z8d_A | 0 | 110 | 519 | 53 | 460 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 2azd_B | 0 | 576 | 969 | 404 | 793 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 2azd_B | 0 | 136 | 462 | 57 | 375 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 2azd_A | 0 | 576 | 969 | 404 | 793 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778303 | 867 | 109 | 975 | 0 |
HO797178 | 399 | 577 | 975 | 0 |
HO620767 | 401 | 575 | 975 | 0 |
HO613954 | 401 | 575 | 975 | 0 |
HO778303 | 96 | 21 | 111 | 0.00006 |
Sequence Alignments (This image is cropped. Click for full image.) |
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