| Basic Information | |
|---|---|
| Species | Phaseolus vulgaris |
| Cazyme ID | Phvul.003G078800.1 |
| Family | CBM53 |
| Protein Properties | Length: 1088 Molecular Weight: 124755 Isoelectric Point: 7.5591 |
| Chromosome | Chromosome/Scaffold: 03 Start: 12346797 End: 12356882 |
| Description | starch synthase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM53 | 198 | 283 | 3.1e-31 |
| GQDIEVFLNRNLSTLCNEPNVLVKGAFNDWRWKLFTVRLNKTDQLNGDWWSCKLHVPREAYKVDFVFFNGENVYDNNDKRDFSIPV | |||
| CBM53 | 377 | 463 | 2.1e-31 |
| VRLYYNRKSGPLANAQEVWLHGGHNNWKDKLSLVKRLVKCSKDGDWWCAHVVILEQAVVLDWVFANGPPGNASEYDNNNHKDFHTIV | |||
| CBM53 | 536 | 624 | 9.2e-32 |
| GSTITVFYNPRNTNLNGKPDVWFKHSFNRWTHRNGLFPPQKMLSSKNDTYVKVSVKVPLDAYMIDFVFSEKKDGGIFDNNNTMDYHIPV | |||
| GT5 | 635 | 1078 | 0 |
| HIVHIAVEMAPIAKVGGLGDVVTSLSRAIQDLDHRVDIILPKYDCLNLNNVENFQYHKNYFWNGTEIKVWHGKVEGLSVYFLEPQNEFFRVGRVYGCAND AKRFGFFCHAALEYLFQNGFHPDIIHCHDWSSAPVAWLCKEQYTHCSLSKAGIVFTIHNLEFGAQLIGKAMAYTNMATTVSPTYSREVYENSAIAPHRHK FRGILNGIDLDIWDPFNDKFIPMSYTSKNVVEGKKAAKEALQQKLGLRKVDLPLLGVISRLTNQKGIDLIRHAIYRTLERGGQVVLLGSAPDPRIQNEFE NLANELHSLHHDRVRLCLIYDEPLSHLIYAGADFIGVPSIFEPCGLTQLVAMRYGSIPIVRKTGGLYDTVFDVDDDKDRAHAEYLKPNGFSFDGANAPGV DYALNRAISRWYDDRDWFNTLCKTVMEQDWSWNRPALHYLELYH | |||
| Full Sequence |
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| Protein Sequence Length: 1088 Download |
| MGMPLLLNCK TVFTNGRTCF GAGLFSPTTA QTNQSVKTGR HSIGIHACAD FSSRRQKKIF 60 IAMPKSYGFD SKGFVVIPAV ETSNLVGKDE NVYIVHKQDN VDTSNMGNVE YLNENHGKII 120 TIVEESDVNG SDNKVINREV VIGRINYDND DILDKETSQL LKLQLEESFK RQEIVRIAKE 180 NVSLHNKLFV YPPVVKPGQD IEVFLNRNLS TLCNEPNVLV KGAFNDWRWK LFTVRLNKTD 240 QLNGDWWSCK LHVPREAYKV DFVFFNGENV YDNNDKRDFS IPVDGGIDAS EFENFLLEEK 300 RIELERLAKE EAEKEEEEKK KRKMELEKVG RDEDRSMARA EVEKKKKLLQ ELTKNAVKCI 360 ENVWYMEPSE FKEKNLVRLY YNRKSGPLAN AQEVWLHGGH NNWKDKLSLV KRLVKCSKDG 420 DWWCAHVVIL EQAVVLDWVF ANGPPGNASE YDNNNHKDFH TIVTNKGMPN KETWISEEEK 480 IYIKLQEKRR LREEAALVKV EETTRLKAEI KKKTLQRHLL SQKHIVFTEP LHVQAGSTIT 540 VFYNPRNTNL NGKPDVWFKH SFNRWTHRNG LFPPQKMLSS KNDTYVKVSV KVPLDAYMID 600 FVFSEKKDGG IFDNNNTMDY HIPVLGSTVK ETPMHIVHIA VEMAPIAKVG GLGDVVTSLS 660 RAIQDLDHRV DIILPKYDCL NLNNVENFQY HKNYFWNGTE IKVWHGKVEG LSVYFLEPQN 720 EFFRVGRVYG CANDAKRFGF FCHAALEYLF QNGFHPDIIH CHDWSSAPVA WLCKEQYTHC 780 SLSKAGIVFT IHNLEFGAQL IGKAMAYTNM ATTVSPTYSR EVYENSAIAP HRHKFRGILN 840 GIDLDIWDPF NDKFIPMSYT SKNVVEGKKA AKEALQQKLG LRKVDLPLLG VISRLTNQKG 900 IDLIRHAIYR TLERGGQVVL LGSAPDPRIQ NEFENLANEL HSLHHDRVRL CLIYDEPLSH 960 LIYAGADFIG VPSIFEPCGL TQLVAMRYGS IPIVRKTGGL YDTVFDVDDD KDRAHAEYLK 1020 PNGFSFDGAN APGVDYALNR AISRWYDDRD WFNTLCKTVM EQDWSWNRPA LHYLELYHVA 1080 RNASRCS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 2.0e-133 | 625 | 1081 | 512 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 3.0e-145 | 634 | 1078 | 486 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 5.0e-149 | 634 | 1078 | 480 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-158 | 635 | 1078 | 488 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02316 | PLN02316 | 0 | 61 | 1081 | 1037 | + synthase/transferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| GO:2001070 | starch binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACT09059.1 | 0 | 105 | 1081 | 243 | 1227 | starch synthase III precursor [Solanum lycopersicum] |
| DDBJ | BAF49176.1 | 0 | 1 | 1080 | 1 | 1161 | starch synthase III [Phaseolus vulgaris] |
| EMBL | CAB40374.1 | 0 | 150 | 1080 | 213 | 1143 | Starch synthase isoform SS III [Vigna unguiculata] |
| RefSeq | XP_002269011.1 | 0 | 27 | 1081 | 72 | 1139 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002518476.1 | 0 | 86 | 1081 | 79 | 1057 | starch synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 634 | 1078 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 634 | 1078 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 634 | 1078 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 634 | 1078 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 634 | 1078 | 1 | 474 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778003 | 718 | 149 | 865 | 0 |
| HO794758 | 570 | 513 | 1081 | 0 |
| HO651392 | 411 | 671 | 1081 | 0 |
| CK247929 | 314 | 620 | 933 | 0 |
| HO794758 | 105 | 188 | 287 | 0.0003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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