| Basic Information | |
|---|---|
| Species | Phaseolus vulgaris |
| Cazyme ID | Phvul.011G033100.1 |
| Family | CBM22 |
| Protein Properties | Length: 571 Molecular Weight: 64760.3 Isoelectric Point: 7.9624 |
| Chromosome | Chromosome/Scaffold: 11 Start: 2871434 End: 2875629 |
| Description | Glycosyl hydrolase family 10 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM22 | 41 | 156 | 1.8e-22 |
| IIKNPELNNGVEGWTSFGDAKIEHRESSGNKYVVAHSRKKAYDSVSQNIQIEKDKHYTLSAWIQVSKGNVLVTAFVKTRTGSKFGGAIFAETNCWSMLKG GFTAEESGPAELYFEG | |||
| GH10 | 217 | 499 | 0 |
| KLGFPFGSSMNKYILNNKLYQNWFTSRFTVTTFENEMKWYSTEAVKGKVDYTTADAMLQFAKQHNIEVRGHNVFWDDPHYQPSWVPSLSPTQLSSAVEER VKSVVSKYKGKLISWDVVNENMHFSFYESKLGKTFSGKIFNEVHKIDGQTTLFLNDYNTIEEISDGESSPARYLQKIKQIQSYAGNRGIPMGIGLESHFS HAINFPYMRSSLDYLGATRLPIWITELDVASQPRQLQYFELALKEAHSHPMVRGIVMWTAWSPQGCYKLCLVDNNFKNLPAGN | |||
| Full Sequence |
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| Protein Sequence Length: 571 Download |
| MNLFVSFVCT TGFEVDALEY DYSASIECLT HPLKPQYKGG IIKNPELNNG VEGWTSFGDA 60 KIEHRESSGN KYVVAHSRKK AYDSVSQNIQ IEKDKHYTLS AWIQVSKGNV LVTAFVKTRT 120 GSKFGGAIFA ETNCWSMLKG GFTAEESGPA ELYFEGNDTS VDIWIDSVSL QPFTEKEWSS 180 HQDQSIEKIR KRKVLIQALN EEGKPLANAN VSFALKKLGF PFGSSMNKYI LNNKLYQNWF 240 TSRFTVTTFE NEMKWYSTEA VKGKVDYTTA DAMLQFAKQH NIEVRGHNVF WDDPHYQPSW 300 VPSLSPTQLS SAVEERVKSV VSKYKGKLIS WDVVNENMHF SFYESKLGKT FSGKIFNEVH 360 KIDGQTTLFL NDYNTIEEIS DGESSPARYL QKIKQIQSYA GNRGIPMGIG LESHFSHAIN 420 FPYMRSSLDY LGATRLPIWI TELDVASQPR QLQYFELALK EAHSHPMVRG IVMWTAWSPQ 480 GCYKLCLVDN NFKNLPAGNV VDKFISQWKS NKLSGVTDKN GFLEITLFHG DYEMEILHPN 540 QKNNTFTQIL KVTPSDKSNQ TQPLVKLQIK * 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 2.0e-5 | 39 | 160 | 133 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 4.0e-36 | 198 | 497 | 338 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| pfam00331 | Glyco_hydro_10 | 1.0e-55 | 220 | 501 | 309 | + Glycosyl hydrolase family 10. | ||
| smart00633 | Glyco_10 | 2.0e-74 | 253 | 501 | 275 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN10199.1 | 0 | 12 | 565 | 24 | 581 | endoxylanase [Carica papaya] |
| RefSeq | XP_002264556.1 | 0 | 16 | 567 | 108 | 656 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002264605.1 | 0 | 11 | 565 | 18 | 569 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313180.1 | 0 | 27 | 538 | 2 | 512 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532418.1 | 0 | 12 | 557 | 15 | 559 | Endo-1,4-beta-xylanase C precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1nq6_A | 5e-28 | 222 | 501 | 15 | 298 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
| PDB | 1ta3_B | 3e-26 | 222 | 474 | 17 | 268 | B Chain B, Crystal Structure Of Xylanase (Gh10) In Complex With Inhibitor (Xip) |
| PDB | 1e0v_A | 7e-24 | 207 | 449 | 1 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0n_A | 8e-24 | 207 | 449 | 1 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| PDB | 1v0m_A | 8e-24 | 207 | 449 | 1 | 243 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX266128 | 274 | 236 | 508 | 0 |
| BI312030 | 244 | 327 | 569 | 0 |
| GR150167 | 263 | 32 | 293 | 0 |
| GR160803 | 262 | 64 | 324 | 0 |
| EX266128 | 31 | 513 | 541 | 3.4 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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