| Basic Information | |
|---|---|
| Species | Phaseolus vulgaris |
| Cazyme ID | Phvul.011G151400.1 |
| Family | CBM53 |
| Protein Properties | Length: 1166 Molecular Weight: 132228 Isoelectric Point: 5.637 |
| Chromosome | Chromosome/Scaffold: 11 Start: 39734272 End: 39747901 |
| Description | starch synthase 3 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM53 | 281 | 364 | 8.9e-31 |
| QDIEVFLNKSLSALSDEPQILIMGAFNDWKWKSFSVKLNKTRLKGDWWSCQLYVPREAYQVDFVFFNGQNVYDNNDQKDFRIAI | |||
| CBM53 | 617 | 705 | 3.3e-33 |
| GSTVTVFYNPSNTNLNGKPEVWFRCSFNHWTHSNGSLPPQRMLPAENGTHVKASVKVPLDAYKMDFVFSESEHGGVFDNKLGMDYHIPV | |||
| CBM53 | 458 | 545 | 2.8e-33 |
| IRLYYNRSSGPLVHANEIWIHGGHNNWKYGLSIIERLVKSVLKGGDWWYADVIVPDQALVLDWVFADGAPQKAGIYDNNRKQDFHAIV | |||
| GT5 | 716 | 1159 | 0 |
| HIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSNIKDFECQKNYLWAGTDIKVWHGKVEGLSVYFLEPQNGFFQVGCVYGRGND AERFGFFCHAALEFLLQNGFHPDIIHCHDWSSAPVAWIFKDNYAHYGLSKARLVFTIHNLEFGAHFIGKAMQYADKATTVSPTYSREIAGNPVIAPHLHK FHGIINGIDPDIWDPYNDKFIPVSYSSENVVEGKKAAKEALQQKLGLKRADLPLVGIITRLTHQKGIHLIKHAIWRTLERGGQVVLLGSAPDPRIQNDFV NLKNELHSSHNDRARLCLAYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDSVFDVDHDKDRAQAQGLETNGFGFDGTDVGGV DYALNRAITTWFDSRDWFNSLCKRVMEQDWSWNRPALDYLELYH | |||
| Full Sequence |
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| Protein Sequence Length: 1166 Download |
| MEMSLQLNCK TVFPYRSGCV KPNSFPGVLP RRSVTFGIGY MCSPCKAGWG ASFVRASADF 60 SRRRQQKKVS VTRPKGTAAK GFVPSKRNAR LKKGDSVTPV VSEVSGGDKK QTVDVNLDDD 120 KEGGVEFSED VRFEVIDRTD EIVGDVGELL LLDETVNVIE NSQPNISIID EDVEVLELKE 180 DIPYNGGVGI VEDSEEGLLD RAEIDENVKD TNTDTLDEIT EEAVEESRTA NDDRIKEEAS 240 RLLKLELEEN QRQQEIERIA EEKLSQGTKL FVYPPVVKPD QDIEVFLNKS LSALSDEPQI 300 LIMGAFNDWK WKSFSVKLNK TRLKGDWWSC QLYVPREAYQ VDFVFFNGQN VYDNNDQKDF 360 RIAIEGGMDA SAFENFLLDE KRKELEELAR VQAERERQAE EQRRIEADRA AKAEDRSRAR 420 VEVQRMQETL PQLLKNAVKS IDNVWYIEPS DFKGKDLIRL YYNRSSGPLV HANEIWIHGG 480 HNNWKYGLSI IERLVKSVLK GGDWWYADVI VPDQALVLDW VFADGAPQKA GIYDNNRKQD 540 FHAIVPMVTP DEQYWVEEEQ LLYRKFQEER RLRDEAMRHK AEKIAQMKAE TKEKTLKRFL 600 LSQKHIVFTD PLDVQAGSTV TVFYNPSNTN LNGKPEVWFR CSFNHWTHSN GSLPPQRMLP 660 AENGTHVKAS VKVPLDAYKM DFVFSESEHG GVFDNKLGMD YHIPVFGGIV KEPPLHIVHI 720 AVEMAPIAKV GGLGDVVTSL SRAVQDLNHN VDIILPKYDC LNLSNIKDFE CQKNYLWAGT 780 DIKVWHGKVE GLSVYFLEPQ NGFFQVGCVY GRGNDAERFG FFCHAALEFL LQNGFHPDII 840 HCHDWSSAPV AWIFKDNYAH YGLSKARLVF TIHNLEFGAH FIGKAMQYAD KATTVSPTYS 900 REIAGNPVIA PHLHKFHGII NGIDPDIWDP YNDKFIPVSY SSENVVEGKK AAKEALQQKL 960 GLKRADLPLV GIITRLTHQK GIHLIKHAIW RTLERGGQVV LLGSAPDPRI QNDFVNLKNE 1020 LHSSHNDRAR LCLAYDEPLS HLIYAGADFI LVPSIFEPCG LTQLTAMRYG SIPVVRKTGG 1080 LFDSVFDVDH DKDRAQAQGL ETNGFGFDGT DVGGVDYALN RAITTWFDSR DWFNSLCKRV 1140 MEQDWSWNRP ALDYLELYHA ACKLQ* 1200 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 5.0e-130 | 715 | 1161 | 495 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 2.0e-141 | 715 | 1161 | 488 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 2.0e-147 | 715 | 1163 | 490 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 8.0e-164 | 716 | 1159 | 488 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02316 | PLN02316 | 0 | 69 | 1163 | 1104 | + synthase/transferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| GO:2001070 | starch binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF49176.1 | 0 | 1 | 1165 | 1 | 1165 | starch synthase III [Phaseolus vulgaris] |
| EMBL | CAB40374.1 | 0 | 1 | 1165 | 1 | 1147 | Starch synthase isoform SS III [Vigna unguiculata] |
| RefSeq | XP_002269011.1 | 0 | 66 | 1163 | 32 | 1140 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305571.1 | 0 | 196 | 1163 | 60 | 1017 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518476.1 | 0 | 69 | 1163 | 1 | 1058 | starch synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 715 | 1159 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 715 | 1159 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 715 | 1159 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 715 | 1159 | 1 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 715 | 1159 | 1 | 474 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO778003 | 724 | 223 | 946 | 0 |
| HO794758 | 574 | 594 | 1166 | 0 |
| HO795466 | 448 | 134 | 580 | 0 |
| HO794758 | 109 | 264 | 368 | 0.01 |
| HO794758 | 126 | 422 | 545 | 0.13 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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