CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.001G092200.4
FamilyCBM49
Protein PropertiesLength: 468 Molecular Weight: 51163.6 Isoelectric Point: 9.5941
ChromosomeChromosome/Scaffold: 01 Start: 7243607 End: 7247307
Descriptionglycosyl hydrolase 9C2
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM493754521.9e-37
  VAIVQKTTATWIAKGKTYYRYSTIVTNKSAKELKDIKLSISKLYGPLWGLTKSGNFYAFPSWITSLAAGKSLEFVYVH
GH943330
  DRRAYKIDPSNPGSDLAGETAAAMAAASIVFRRSNPSYANELLTHARQLFDFADRYRGKYDSSITVAQKYYRSVSGYNDELLWAAAWMYQATNNQYYLNY
  LGNNGDSMGGTGWGMTEFGWDVKYAGVQTLVAKFLMQGKAGHHAPVFEKYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLTTVYSD
  YLASAGRNLNCAAGNVAPTQLLAFAKSQVDYILGDNPRATSYMVGYGNNYPRQVHHRGSSIVSYKVDPTFVTCRGGYATWFSRKGSDPNLLTGAIVGGPD
  AYDNFADERDNYEQTEPATYNNAPLLGLLA
Full Sequence
Protein Sequence     Length: 468     Download
MTTDRRAYKI DPSNPGSDLA GETAAAMAAA SIVFRRSNPS YANELLTHAR QLFDFADRYR    60
GKYDSSITVA QKYYRSVSGY NDELLWAAAW MYQATNNQYY LNYLGNNGDS MGGTGWGMTE    120
FGWDVKYAGV QTLVAKFLMQ GKAGHHAPVF EKYQQKAEYF MCSCLGKGSR NVQKTPGGLI    180
FRQRWNNMQF VTSASFLTTV YSDYLASAGR NLNCAAGNVA PTQLLAFAKS QVDYILGDNP    240
RATSYMVGYG NNYPRQVHHR GSSIVSYKVD PTFVTCRGGY ATWFSRKGSD PNLLTGAIVG    300
GPDAYDNFAD ERDNYEQTEP ATYNNAPLLG LLARLSGGHG GYNQLLPVVV PAPIEKKPAP    360
QTKITPAPAS TSAPVAIVQK TTATWIAKGK TYYRYSTIVT NKSAKELKDI KLSISKLYGP    420
LWGLTKSGNF YAFPSWITSL AAGKSLEFVY VHSASAADVS VSSYTLA* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00759Glyco_hydro_94.0e-1211333335+
PLN00119PLN001199.0e-1331336336+
PLN02420PLN024202.0e-1441335337+
PLN02340PLN023401.0e-1661450453+
PLN02171PLN0217101467471+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005576extracellular region
GO:0005975carbohydrate metabolic process
GO:0030246carbohydrate binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAI68019.101467156620endo-beta-1,4-glucanase [Prunus persica]
EMBLCAI68020.101467156620endo-beta-1,4-glucanase [Prunus persica]
RefSeqXP_002270880.101467159629PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002299478.101467156622predicted protein [Populus trichocarpa]
RefSeqXP_002303645.101466156621glycosyl hydrolase family 9 [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1ksd_A01335133428B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules
PDB1ksc_A01335133428B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules
PDB1ks8_A01335133428A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5.
PDB2xfg_A01335155459B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules
PDB4tf4_B2.8026e-451395134501B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
ES907037289633510
DV46621027442770
CO072186282723530
EX680399279353130
DY92262829512950
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_002_01464.1.518.596Aquca_037_00141.1.542.619Aquca_013_00114.1.534.611
Arabidopsis lyrata474038.535.614489943.534.611892975.528.605
Arabidopsis thalianaAT1G64390.1.528.605AT1G48930.1.535.614AT4G11050.1.534.611
Brachypodium distachyonBradi2g32270.1.538.616Bradi2g07150.1.534.613
Brassica rapaBra032270.517.596Bra000732.268.345Bra027699.529.606Bra018765.532.611Bra027735.528.605
Carica papayaevm.model.supercontig_183.4.367.446evm.TU.contig_27379.2.529.606
Capsella rubellaCarubv10012624m.534.613Carubv10003874m.535.612Carubv10019981m.528.605
Citrus clementinaCiclev10019301m.537.614Ciclev10033912m.569.648
Citrus sinensisorange1.1g043219m.499.578orange1.1g019436m.249.326orange1.1g017562m.277.354orange1.1g011712m.387.464orange1.1g006835m.537.614
Cucumis sativusCucsa.107370.1.527.604Cucsa.128330.1.503.582Cucsa.303850.1.533.608
Eucalyptus grandisEucgr.D01733.1.529.606Eucgr.J00862.1.484.562Eucgr.E00858.1.526.602Eucgr.D01896.1
Fragaria vescamrna32087.1-v1.0-hybrid.632.709mrna11058.1-v1.0-hybrid.533.612
Glycine maxGlyma12g03050.1.537.616Glyma05g36930.1.532.609Glyma08g02610.1.533.610Glyma11g10760.1.535.614
Gossypium raimondiiGorai.003G080800.1.533.609Gorai.008G254000.1.534.611Gorai.004G133700.1.536.613Gorai.005G210200.1.530.608
Linum usitatissimumLus10003888.529.606Lus10010201.535.613Lus10032377.534.611Lus10017402.508.586Lus10001833.527.603
Lus10033956
Malus domesticaMDP0000276676.536.613MDP0000131267.528.605MDP0000548943MDP0000722052.313.390MDP0000826600.538.616
Manihot esculentacassava4.1_004404m.486.565cassava4.1_003698m.530.607
Medicago truncatulaMedtr4g074960.1.571.649
Mimulus guttatusmgv1a003302m.501.580
Oryza sativaLOC_Os01g12070.1.544.625LOC_Os01g12030.1.543.620LOC_Os04g57860.1.531.610LOC_Os05g12150.1.535.613
Panicum virgatumPavirv00000152m.548.625Pavirv00066185m.348.426Pavirv00000772m.535.612Pavirv00030375m.537.614Pavirv00029375m.528.607
Physcomitrella patensPp1s176_127V6.1.544.623
Phaseolus vulgarisPhvul.011G030300.1.567.645Phvul.002G297600.1.530.607
Picea abiesMA_895058g0010MA_10437098g0010.516.596MA_127108g0010.524.603MA_42717g0010.527.604MA_10241783g0010.543.621
MA_19509g0020.547.626
Populus trichocarpaPotri.003G139600.1.530.607Potri.001G092200.1.530.607Potri.001G092200.5.285.362Potri.007G071200.1.520.599Potri.007G071200.2.519.598
Potri.001G092200.4.375.452
Prunus persicappa002939m.528.605ppa022524m.499.578
Ricinus communis29675.m000388.528.607
Setaria italicaSi000642m.549.626Si021474m.530.607Si021476m.528.606
Selaginella moellendorffii234652.525.60399802.550.630
Sorghum bicolorSb09g006670.1.535.612Sb03g001560.1.561.639Sb06g032760.1.534.615
Thellungiella halophilaThhalv10023353m.527.604Thhalv10011318m.534.613Thhalv10028514m.535.612
Vitis viniferaGSVIVT01019523001.537.614GSVIVT01012043001.524.602
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)