Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.001G092200.4 |
Family | CBM49 |
Protein Properties | Length: 468 Molecular Weight: 51163.6 Isoelectric Point: 9.5941 |
Chromosome | Chromosome/Scaffold: 01 Start: 7243607 End: 7247307 |
Description | glycosyl hydrolase 9C2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM49 | 375 | 452 | 1.9e-37 |
VAIVQKTTATWIAKGKTYYRYSTIVTNKSAKELKDIKLSISKLYGPLWGLTKSGNFYAFPSWITSLAAGKSLEFVYVH | |||
GH9 | 4 | 333 | 0 |
DRRAYKIDPSNPGSDLAGETAAAMAAASIVFRRSNPSYANELLTHARQLFDFADRYRGKYDSSITVAQKYYRSVSGYNDELLWAAAWMYQATNNQYYLNY LGNNGDSMGGTGWGMTEFGWDVKYAGVQTLVAKFLMQGKAGHHAPVFEKYQQKAEYFMCSCLGKGSRNVQKTPGGLIFRQRWNNMQFVTSASFLTTVYSD YLASAGRNLNCAAGNVAPTQLLAFAKSQVDYILGDNPRATSYMVGYGNNYPRQVHHRGSSIVSYKVDPTFVTCRGGYATWFSRKGSDPNLLTGAIVGGPD AYDNFADERDNYEQTEPATYNNAPLLGLLA |
Full Sequence |
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Protein Sequence Length: 468 Download |
MTTDRRAYKI DPSNPGSDLA GETAAAMAAA SIVFRRSNPS YANELLTHAR QLFDFADRYR 60 GKYDSSITVA QKYYRSVSGY NDELLWAAAW MYQATNNQYY LNYLGNNGDS MGGTGWGMTE 120 FGWDVKYAGV QTLVAKFLMQ GKAGHHAPVF EKYQQKAEYF MCSCLGKGSR NVQKTPGGLI 180 FRQRWNNMQF VTSASFLTTV YSDYLASAGR NLNCAAGNVA PTQLLAFAKS QVDYILGDNP 240 RATSYMVGYG NNYPRQVHHR GSSIVSYKVD PTFVTCRGGY ATWFSRKGSD PNLLTGAIVG 300 GPDAYDNFAD ERDNYEQTEP ATYNNAPLLG LLARLSGGHG GYNQLLPVVV PAPIEKKPAP 360 QTKITPAPAS TSAPVAIVQK TTATWIAKGK TYYRYSTIVT NKSAKELKDI KLSISKLYGP 420 LWGLTKSGNF YAFPSWITSL AAGKSLEFVY VHSASAADVS VSSYTLA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00759 | Glyco_hydro_9 | 4.0e-121 | 1 | 333 | 335 | + Glycosyl hydrolase family 9. | ||
PLN00119 | PLN00119 | 9.0e-133 | 1 | 336 | 336 | + endoglucanase | ||
PLN02420 | PLN02420 | 2.0e-144 | 1 | 335 | 337 | + endoglucanase | ||
PLN02340 | PLN02340 | 1.0e-166 | 1 | 450 | 453 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 1 | 467 | 471 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005576 | extracellular region |
GO:0005975 | carbohydrate metabolic process |
GO:0030246 | carbohydrate binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI68019.1 | 0 | 1 | 467 | 156 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
EMBL | CAI68020.1 | 0 | 1 | 467 | 156 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
RefSeq | XP_002270880.1 | 0 | 1 | 467 | 159 | 629 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299478.1 | 0 | 1 | 467 | 156 | 622 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303645.1 | 0 | 1 | 466 | 156 | 621 | glycosyl hydrolase family 9 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 1 | 335 | 133 | 428 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ksc_A | 0 | 1 | 335 | 133 | 428 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ks8_A | 0 | 1 | 335 | 133 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 1 | 335 | 155 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 2.8026e-45 | 1 | 395 | 134 | 501 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES907037 | 289 | 63 | 351 | 0 |
DV466210 | 274 | 4 | 277 | 0 |
CO072186 | 282 | 72 | 353 | 0 |
EX680399 | 279 | 35 | 313 | 0 |
DY922628 | 295 | 1 | 295 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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