y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.003G139600.1 |
Family | CBM49 |
Protein Properties | Length: 623 Molecular Weight: 68188.9 Isoelectric Point: 8.9114 |
Chromosome | Chromosome/Scaffold: 03 Start: 15733245 End: 15738267 |
Description | glycosyl hydrolase 9C2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM49 | 530 | 607 | 6.8e-40 |
ISIAQKMTTTWIAKGKTYYRYSITVTNKSAKELKDIKLSISKLYGPLWGLTKSGNSYAFPSWMSSLPAGKSLEFVYIH | |||
GH9 | 27 | 488 | 0 |
DYGQALSKSLLFFEAQRSGYLPHNQRVTWRANSGLNDGKASGVDLVGGYYDAGDNVKFGLPMAFTITMMSWSIIEYGKQLGSSGELGNTMDAVKWGTDYL IKAHPQPYVLYGEVGDGNTDHYCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRHSNPTYANELLTHAHQLFDFADKYRGKYDSSISVAQ KYYRSVSGYNDELLWAAAWLYQATNNQYYLDYLGNNGDSMGGTGWGMTEFGWDVKYAGVQTLVAKFLMQGKAGHHAPVFEKYQQKAEYFMCSCLGKGTRN VQKTPGGLIYRQRWNNMQFVTGASFLGAVYSDYLASAGRNLNCAAGNVAPSQLLTFAKSQVDYILGDNPRATSYMVGYGNNYPRQVHHRGSSIVSYKVDP TFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGLLA |
Full Sequence |
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Protein Sequence Length: 623 Download |
MVKFARLISM APLLLLLCFP LAFAGHDYGQ ALSKSLLFFE AQRSGYLPHN QRVTWRANSG 60 LNDGKASGVD LVGGYYDAGD NVKFGLPMAF TITMMSWSII EYGKQLGSSG ELGNTMDAVK 120 WGTDYLIKAH PQPYVLYGEV GDGNTDHYCW QRPEDMTTDR RAYKIDPSNP GSDLAGETAA 180 AMAAASIVFR HSNPTYANEL LTHAHQLFDF ADKYRGKYDS SISVAQKYYR SVSGYNDELL 240 WAAAWLYQAT NNQYYLDYLG NNGDSMGGTG WGMTEFGWDV KYAGVQTLVA KFLMQGKAGH 300 HAPVFEKYQQ KAEYFMCSCL GKGTRNVQKT PGGLIYRQRW NNMQFVTGAS FLGAVYSDYL 360 ASAGRNLNCA AGNVAPSQLL TFAKSQVDYI LGDNPRATSY MVGYGNNYPR QVHHRGSSIV 420 SYKVDPTFVS CRGGYATWFS RKGSDPNLLT GAIVGGPDAY DNFADERDNY EQTEPATYNN 480 APLLGLLARL SGGHGGYNQL LPVVVPGPIE KKPAPQSKVT PAPASTSAPI SIAQKMTTTW 540 IAKGKTYYRY SITVTNKSAK ELKDIKLSIS KLYGPLWGLT KSGNSYAFPS WMSSLPAGKS 600 LEFVYIHSAS AADISVSSYS LT* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 0 | 1 | 622 | 629 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 25 | 619 | 598 | + endoglucanase | ||
PLN02420 | PLN02420 | 0 | 25 | 490 | 468 | + endoglucanase | ||
PLN00119 | PLN00119 | 0 | 27 | 491 | 465 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 27 | 488 | 464 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005576 | extracellular region |
GO:0005975 | carbohydrate metabolic process |
GO:0030246 | carbohydrate binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI68019.1 | 0 | 1 | 621 | 1 | 619 | endo-beta-1,4-glucanase [Prunus persica] |
EMBL | CAI68020.1 | 0 | 1 | 621 | 1 | 619 | endo-beta-1,4-glucanase [Prunus persica] |
RefSeq | XP_002270880.1 | 0 | 1 | 621 | 1 | 628 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299478.1 | 0 | 1 | 621 | 1 | 621 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303645.1 | 0 | 1 | 622 | 1 | 622 | glycosyl hydrolase family 9 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 26 | 490 | 3 | 428 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1ksc_A | 0 | 26 | 490 | 3 | 428 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 1ks8_A | 0 | 26 | 490 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 27 | 554 | 5 | 505 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 27 | 554 | 5 | 505 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |