CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.004G206900.3
FamilyGT13
Protein PropertiesLength: 412 Molecular Weight: 48357.2 Isoelectric Point: 7.3211
ChromosomeChromosome/Scaffold: 04 Start: 21586083 End: 21589552
Descriptionalpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT13234070
  IQMRLFATQSEYADRLAVALESENHCTSQSRLLIDQISIHQSNIVSLQEQNRRQAEECRQLKALLDDLERKGVRKVVDKAQVPVAAVVIMACNRADYLQR
  TIESILKYQSSVASKYPLFVSQDGSDPNVRSKAMSYDQLMYIQHLDSEPVQTERPGELIAYYKIARHYKWAMDQLFYKHNFSRVIILEDDMEIAPDFFDY
  FEAAAALLEKDKSIMAVSSWNDNGQKQFVHDPYELYRSDFFPGLGWMLTKSIWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQ
  FFQQYLQPIKLNNVKVDWKAKDLSYLTKDNYTKHFADIVRKAKPVHGTDAVLKAYNIEGDVRIQYRDQPDFEWIAHQFGIFEEWK
Full Sequence
Protein Sequence     Length: 412     Download
MRKIRCDYRC LLLIAAVVAF FYIQMRLFAT QSEYADRLAV ALESENHCTS QSRLLIDQIS    60
IHQSNIVSLQ EQNRRQAEEC RQLKALLDDL ERKGVRKVVD KAQVPVAAVV IMACNRADYL    120
QRTIESILKY QSSVASKYPL FVSQDGSDPN VRSKAMSYDQ LMYIQHLDSE PVQTERPGEL    180
IAYYKIARHY KWAMDQLFYK HNFSRVIILE DDMEIAPDFF DYFEAAAALL EKDKSIMAVS    240
SWNDNGQKQF VHDPYELYRS DFFPGLGWML TKSIWDELSP KWPKAYWDDW LRLKENHKGR    300
QFIRPEVCRT YNFGEHGSSL GQFFQQYLQP IKLNNVKVDW KAKDLSYLTK DNYTKHFADI    360
VRKAKPVHGT DAVLKAYNIE GDVRIQYRDQ PDFEWIAHQF GIFEEWKVFL L*            420
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam13641Glyco_tranf_2_30.009108220116+
cd00761Glyco_tranf_GTA_type7.0e-5109242134+
cd02514GT13_GLCNAC-TI8.0e-158106407307+
pfam03071GNT-I014407400+
Gene Ontology
GO TermDescription
GO:0000139Golgi membrane
GO:0003827alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
GO:0006487protein N-linked glycosylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAC80700.1014071406N-acetylglucosaminyltransferase I [Arabidopsis thaliana]
EMBLCAC80702.1034075408N-acetylglucosaminyltransferase I [Nicotiana tabacum]
EMBLCBI29533.1014071403unnamed protein product [Vitis vinifera]
RefSeqNP_195537.2014071406CGL1 (COMPLEX GLYCAN LESS 1); alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase/ protein N-acetylglucosaminyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana]
RefSeqXP_002313578.1014071403predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1foa_A01034075311A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
PDB1fo9_A01034075311A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
PDB2apc_A01064072305A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
PDB2am5_A01064072305A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
PDB2am4_A01064072305A Chain A, Crystal Structure Of N-acetylglucosaminyltransferase I
Transmembrane Domains
StartEnd
1229
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
ES8416562791294070
DT50109326712670
GO802527324303520
GO86578332543260
EE620302263893510
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_007_00911.3Aquca_007_00911.4Aquca_007_00911.2Aquca_007_00911.1Aquca_007_00911.5
Arabidopsis lyrata912565490588
Arabidopsis thalianaAT4G38240.1AT4G38240.2AT4G38240.3
Brachypodium distachyonBradi3g60820.3Bradi3g60820.1Bradi3g60820.2
Brassica rapaBra033557
Carica papayaevm.TU.contig_28580.1.22.235evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.235.387evm.TU.contig_28580.1.22.235
Capsella rubellaCarubv10007540m
Citrus clementinaCiclev10028418m
Citrus sinensisorange1.1g019888morange1.1g012912morange1.1g012941m
Cucumis sativusCucsa.099720.1Cucsa.099720.2
Eucalyptus grandisEucgr.L00584.1Eucgr.L00583.1Eucgr.H04987.1Eucgr.H04987.2Eucgr.H04989.3
Eucgr.H04989.2Eucgr.H04989.4Eucgr.H04989.1
Fragaria vescamrna17328.1-v1.0-hybrid
Glycine maxGlyma04g00200.1Glyma06g00230.1
Gossypium raimondiiGorai.008G014000.2Gorai.008G014000.3Gorai.008G014000.1
Linum usitatissimumLus10022994Lus10001389
Malus domesticaMDP0000173465.283.435MDP0000170967.230.351MDP0000170967.22.209MDP0000170967.22.209MDP0000173465.283.435
MDP0000173465.22.268MDP0000173465.22.268MDP0000170967.230.351
Manihot esculentacassava4.1_024783m
Medicago truncatulaMedtr3g118520.1Medtr3g118520.2Medtr3g118520.3
Mimulus guttatusmgv1a006517mmgv1a006750m
Oryza sativaLOC_Os02g58590.1.304.426LOC_Os02g58590.1.304.426LOC_Os02g58590.1.22.283LOC_Os02g58590.1.22.283
Panicum virgatumPavirv00053907mPavirv00020030m
Physcomitrella patensPp1s100_54V6.1Pp1s246_61V6.1
Phaseolus vulgarisPhvul.009G115600.1
Picea abiesMA_901813g0010
Populus trichocarpaPotri.009G168000.2Potri.009G168000.1Potri.009G168000.4Potri.004G206900.1Potri.004G206900.2
Potri.009G168000.3
Prunus persicappa006221m
Ricinus communis29675.m000398.22.23129675.m000398.232.34829675.m000398.232.34829675.m000398.22.231
Setaria italicaSi006441mSi006440m
Selaginella moellendorffii268301
Sorghum bicolorSb08g003660.1
Thellungiella halophilaThhalv10025211mThhalv10025208mThhalv10025250m
Vitis viniferaGSVIVT01002028001GSVIVT01002907001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny