| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.006G029900.1 |
| Family | GH51 |
| Protein Properties | Length: 671 Molecular Weight: 73851.9 Isoelectric Point: 4.8659 |
| Chromosome | Chromosome/Scaffold: 06 Start: 2020663 End: 2028611 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 220 | 653 | 0 |
| KGVIWFDQVSAMPLETYKGHGFQKELIEMLEDIKPQFIRFPGGCFVEGEWLRNAFRWKESIGPWEERPGHFGDVWMYWTDDGLGYFEFLQLSEDLGARPI WVFNNGISHRDEVDTTTVSPFVQEALDGLEFARGASDSKWGSVRAAMGHPEPFDLKYVAVGNEDCWKKNYRGNYLKFYDAIKSAYPDIKIISNCDGSSHS LDHPADYYDFHIYTSASHLFSMTHQFDHTSRSGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDIVEMASYAPLFVNDNDRRWNPDAIVFNSS MHYGTPSYWVLKFFRESSGATLLDAKLQTNSSSLVASAITWTNSVDGETYLKIKIVNFGNRHVSLKVSVDGLGLNSQLSGSTKTVLTSSNVMDENSFTDP NKVVPDLSLLENADKDMNIIIAPYSLTSLDLLTE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 671 Download |
| MGYWKASCSV LLVCFFVGLC SVYQCSAAEV DAYQTAKLIV NASSGRPIPE TLFGIFFEEI 60 NHAGAGGIWA ELVSNRGFEA GGQNTPSNIA PWSIIGDQSS LTVSTDRSSC FERNKVALRM 120 HVLCDSEGSN ICPAGGVGIY NPGFWGMNIE QGKIYKVVLY VRSLGSINVS VSLTSSDGLQ 180 ILATANIVDS DVSNWTKTEV LLEAKGTNPN SRLQLTTSRK GVIWFDQVSA MPLETYKGHG 240 FQKELIEMLE DIKPQFIRFP GGCFVEGEWL RNAFRWKESI GPWEERPGHF GDVWMYWTDD 300 GLGYFEFLQL SEDLGARPIW VFNNGISHRD EVDTTTVSPF VQEALDGLEF ARGASDSKWG 360 SVRAAMGHPE PFDLKYVAVG NEDCWKKNYR GNYLKFYDAI KSAYPDIKII SNCDGSSHSL 420 DHPADYYDFH IYTSASHLFS MTHQFDHTSR SGPKAFVSEY AVTGKDAGTG SLLAALAEAG 480 FLIGLEKNSD IVEMASYAPL FVNDNDRRWN PDAIVFNSSM HYGTPSYWVL KFFRESSGAT 540 LLDAKLQTNS SSLVASAITW TNSVDGETYL KIKIVNFGNR HVSLKVSVDG LGLNSQLSGS 600 TKTVLTSSNV MDENSFTDPN KVVPDLSLLE NADKDMNIII APYSLTSLDL LTESNNIRMP 660 QTDSSARSSI * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 0.0009 | 475 | 644 | 189 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| COG3534 | AbfA | 4.0e-28 | 240 | 382 | 143 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 5.0e-40 | 458 | 644 | 205 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 1.0e-49 | 458 | 644 | 198 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV32544.1 | 0 | 20 | 670 | 18 | 677 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| DDBJ | BAF42035.1 | 0 | 1 | 670 | 1 | 675 | alpha-Arabinosidase1 [Pyrus communis] |
| RefSeq | XP_002307940.1 | 0 | 1 | 670 | 1 | 670 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322584.1 | 0 | 1 | 670 | 5 | 667 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 25 | 670 | 29 | 678 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 1e-21 | 239 | 653 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 1e-21 | 239 | 653 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 1e-21 | 239 | 653 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 1e-21 | 239 | 653 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 1e-21 | 239 | 653 | 47 | 484 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
