| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.007G071200.1 |
| Family | CBM49 |
| Protein Properties | Length: 613 Molecular Weight: 68488.1 Isoelectric Point: 6.7465 |
| Chromosome | Chromosome/Scaffold: 07 Start: 9333763 End: 9336836 |
| Description | glycosyl hydrolase 9C1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM49 | 520 | 599 | 2.7e-31 |
| VEFLHSITKTWTVGPTTYYRHKVIIKNKSEKPIKDLKLVIEDLSGSIWGLNPTQQRNTYELPQWQKVLQPGSECSFVYVQ | |||
| GH9 | 27 | 487 | 0 |
| NYGDALDKTLMFFEAQRSGKLPANQRVKWRGDSGLKDGYLQGVNLVGGYYDAGDHVKFGLPMAYTVTMLAWGAIDFRKEITELDQMGNALWSLRWGTDYF MKAHTQPNVLWAQVGDGDSDHYCWERAEDMTTPRTAYKLDQNHPGSDLAGETAAALAASAIAFKPYNSSYSNLLLLHAKQLFTFADKYRGLYDDSIQNAK QFYTSSGYSDELLWAAAWLYRATDDEYFLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQILLSQILLEGRGGAYTSTLKQYQAKANYFACACLQKNDGYN IHKTPGGLMYVREWNNLQYASSAAFLLAVYSDSLSAANAKLTCPEGQIPPQALLDFARSQADYFLGKNPKSMSYLVGYGQQYPIHVHHRGSSIASIFSLQ STVECVQGFEKWYRRPEGNPNVIHGALVGGPDQNDNFSDDRSNYEQTEPTLSGCAPLVGLF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 613 Download |
| MKSLNFGGLC LLLGVLVLEA LIAEGFNYGD ALDKTLMFFE AQRSGKLPAN QRVKWRGDSG 60 LKDGYLQGVN LVGGYYDAGD HVKFGLPMAY TVTMLAWGAI DFRKEITELD QMGNALWSLR 120 WGTDYFMKAH TQPNVLWAQV GDGDSDHYCW ERAEDMTTPR TAYKLDQNHP GSDLAGETAA 180 ALAASAIAFK PYNSSYSNLL LLHAKQLFTF ADKYRGLYDD SIQNAKQFYT SSGYSDELLW 240 AAAWLYRATD DEYFLKYVVD NAVYMGGTGW AVKEFSWDNK YAGVQILLSQ ILLEGRGGAY 300 TSTLKQYQAK ANYFACACLQ KNDGYNIHKT PGGLMYVREW NNLQYASSAA FLLAVYSDSL 360 SAANAKLTCP EGQIPPQALL DFARSQADYF LGKNPKSMSY LVGYGQQYPI HVHHRGSSIA 420 SIFSLQSTVE CVQGFEKWYR RPEGNPNVIH GALVGGPDQN DNFSDDRSNY EQTEPTLSGC 480 APLVGLFSKL QTPVPRPTTP HSYQETQKTQ EPYRSHEAPV EFLHSITKTW TVGPTTYYRH 540 KVIIKNKSEK PIKDLKLVIE DLSGSIWGLN PTQQRNTYEL PQWQKVLQPG SECSFVYVQG 600 GPQAKVTVQS YN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02340 | PLN02340 | 0 | 1 | 612 | 613 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 25 | 611 | 602 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 25 | 490 | 468 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 27 | 490 | 464 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 27 | 488 | 464 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27137.1 | 0 | 9 | 612 | 11 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175323.1 | 0 | 24 | 612 | 27 | 627 | AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002277177.1 | 0 | 32 | 612 | 1 | 575 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310080.1 | 0 | 1 | 612 | 1 | 611 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002527135.1 | 0 | 1 | 612 | 1 | 620 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 26 | 474 | 3 | 412 | A Chain A, Crystal Structure Of A Glycosyltransferase Involved In The Glycosylation Of The Major Capsid Of Pbcv-1 |
| PDB | 1ksc_A | 0 | 26 | 474 | 3 | 412 | A Chain A, Crystal Structure Of A Glycosyltransferase Involved In The Glycosylation Of The Major Capsid Of Pbcv-1 |
| PDB | 1ks8_A | 0 | 26 | 474 | 3 | 412 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 26 | 555 | 4 | 494 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 26 | 555 | 4 | 494 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
