| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.010G232700.3 |
| Family | GT64 |
| Protein Properties | Length: 786 Molecular Weight: 89138.5 Isoelectric Point: 8.9594 |
| Chromosome | Chromosome/Scaffold: 10 Start: 21390086 End: 21395028 |
| Description | glycosyltransferase family protein 47 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT64 | 539 | 774 | 0 |
| FTLLTMTYDARLWNLKMYVRHYSRCSSVKEIIVVWNKGIPPRSSDLDSTVPVRIRVEDQNSLNNRFKKDPMIKTRAVLELDDDIMMSCDDIERGFNVWRQ HPDRIVGFYPRLVRGSPLKYRDDKYARRHESYNMILTGAAFIDRTLAFERYWSSEAKAGRELVDRYFNCEDVLLNYLYANASSSQTVEYVRPTWVIDTSK FTGVAISKNTNVHYEIRSNCLLKFSDIYGSIAGRKW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 786 Download |
| MGVYEAGVNG TDGTATATTC SCWNTSMRCW CRWRWENHQQ QQQQHNVLRQ RLVSLVFSSG 60 FTFFLGYLVL YGSIGMFYAW LMFSKPYLRS TNAGVGLKSL GCQEDNEGSW SIGVFYGDSP 120 FSLKPIEAMN EWRDEGAAWP IANPVVTCAS LSDAGFPSNF VADPFLYVQG DTLFLFYETK 180 NSITSQGDIG VAKSIDKGAT WQQLGIALDE DWHLSYPYVF NYLGQIYMMP ESSQKGELRL 240 YRALNFPLQW TLDKVLIKNP LVDSFIINRA GEYWLFGSDH SGVGTRKNGQ LEIWYSSSPL 300 GPWKPHKKNP IYNVDKSVGA RNGGRPFVYD GNLYRVGQDC GETYGRRVRI FKVEVLTKDD 360 YKEVEVPLGF EESNKGPNAW NGARYHHLDV QQLSSGKWIA VMDGDRVPSG DPVHRFILGS 420 ASFAAVTVVV VVLGVLLGAV KCIIPLNWCA HFSGKRNNAL LGRERLNLFS SKVRRFCSRL 480 NRVPLSVRGK IKPNTWAGKL VLAVIFAVGI ALMCAGVKYF YGGNGAEEAY PLNGSYSQFT 540 LLTMTYDARL WNLKMYVRHY SRCSSVKEII VVWNKGIPPR SSDLDSTVPV RIRVEDQNSL 600 NNRFKKDPMI KTRAVLELDD DIMMSCDDIE RGFNVWRQHP DRIVGFYPRL VRGSPLKYRD 660 DKYARRHESY NMILTGAAFI DRTLAFERYW SSEAKAGREL VDRYFNCEDV LLNYLYANAS 720 SSQTVEYVRP TWVIDTSKFT GVAISKNTNV HYEIRSNCLL KFSDIYGSIA GRKWEFNGRK 780 DGWDL* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd08994 | GH43_like_2 | 0.0007 | 253 | 350 | 100 | + Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller. | ||
| pfam09258 | Glyco_transf_64 | 2.0e-72 | 539 | 767 | 231 | + Glycosyl transferase family 64 domain. Members of this family catalyze the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analog of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0031227 | intrinsic to endoplasmic reticulum membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB85556.1 | 0 | 61 | 785 | 40 | 764 | putative protein [Arabidopsis thaliana] |
| RefSeq | NP_196070.2 | 0 | 61 | 785 | 41 | 765 | glycosyltransferase family protein 47 [Arabidopsis thaliana] |
| RefSeq | XP_002262646.1 | 0 | 92 | 785 | 63 | 756 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002315348.1 | 0 | 1 | 785 | 1 | 847 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532924.1 | 0 | 82 | 785 | 1 | 704 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1on8_B | 4e-24 | 531 | 766 | 22 | 267 | A Chain A, Crystal Structure Of Dihydropteridine Reductase From Dictyostelium Discoideum |
| PDB | 1on8_A | 4e-24 | 531 | 766 | 22 | 267 | A Chain A, Crystal Structure Of Dihydropteridine Reductase From Dictyostelium Discoideum |
| PDB | 1on6_B | 4e-24 | 531 | 766 | 22 | 267 | A Chain A, Crystal Structure Of Dihydropteridine Reductase From Dictyostelium Discoideum |
| PDB | 1on6_A | 4e-24 | 531 | 766 | 22 | 267 | A Chain A, Crystal Structure Of Dihydropteridine Reductase From Dictyostelium Discoideum |
| PDB | 1omz_B | 4e-24 | 531 | 766 | 22 | 267 | A Chain A, Crystal Structure Of Dihydropteridine Reductase From Dictyostelium Discoideum |
