| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.016G070200.2 |
| Family | GT4 |
| Protein Properties | Length: 769 Molecular Weight: 86762.5 Isoelectric Point: 8.1068 |
| Chromosome | Chromosome/Scaffold: 16 Start: 5156463 End: 5162779 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT4 | 523 | 625 | 7.5e-21 |
| AYFLGKMVWAKGYKELIDLLAKHKNELDGFKLDVFGNGEDANEVQSTAKRLDLNLNFLKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCA DHP | |||
| Full Sequence |
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| Protein Sequence Length: 769 Download |
| MEATSTSTRT NSNNTAFSLI SRGWKEVRDS ADADLQLMRA RANSFKNLAN SFDREIENFF 60 NSASIASFSV PSPLKPSTSP TEIDFVKKLQ PKISEIRRVY SAPEISKKVL EKWGPTAKLG 120 IDLSAIKNAI VAEGEDDFRG GIVGFDRRRK LGFREFWGEG KEEGGGQFGE WEPIRVLKRR 180 FRELEKKSEF GEIFGGFKNS EFVEKLKSSL KAIRKEPQES KEVPPLDVPE LLAYLVRQSE 240 PFLDQLGVRK GKSTLLDENA NDELDLRIAS VLQSTGHCYD GGFWTDSSKH HPSDGKRHVA 300 IVTTASLPWM TGTAVNPLFR AAYLAKSEKQ NVTLLVPWLC KSDQELVYPN NLTFTSPEEQ 360 ENYIRNWLEE RVGFKADFKI SFYPGKFSKE RRSIIPAGDT SKFVPSKDAD IAILEEPEHL 420 NWYHHGKRWT DKFNHVVGVV HTNYLEYIKR EKNGALQAFL VKHINNLVTR AYCHKVLRLS 480 AATQDLPKSV ICNVHGVNPK FLKIGEKVAA ERELGQQAFS KGAYFLGKMV WAKGYKELID 540 LLAKHKNELD GFKLDVFGNG EDANEVQSTA KRLDLNLNFL KGRDHADDSL HGYKVFINPS 600 ISDVLCTATA EALAMGKFVV CADHPSNEYF RSFPNCLTYK TSEDFVARVK EALANEPQPL 660 TPEQRYNLSW EAATQRFMQY SELDRVLDSE KDVKLSKTNG KSITKAVSMP NLSEMIDGGL 720 AFAHYCLTGN EFLRLCTGAI PGTRDYDKQH CKDLHLLPPQ VENPIYGW* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00534 | Glycos_transf_1 | 6.0e-11 | 525 | 657 | 140 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
| TIGR00032 | argG | 5.0e-11 | 380 | 688 | 342 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| COG0438 | RfaG | 5.0e-11 | 297 | 680 | 399 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| PLN02501 | PLN02501 | 0 | 16 | 768 | 784 | + digalactosyldiacylglycerol synthase | ||
| PLN02846 | PLN02846 | 0 | 296 | 759 | 464 | + digalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA55727.1 | 0 | 3 | 768 | 2 | 780 | digalactosyldiacylglycerol synthase 1 [Vigna unguiculata] |
| Swiss-Prot | Q6DW74 | 0 | 12 | 768 | 9 | 786 | DGDG1_LOTJA RecName: Full=Digalactosyldiacylglycerol synthase 1, chloroplastic; Flags: Precursor |
| RefSeq | XP_002264659.1 | 0 | 12 | 768 | 18 | 797 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323386.1 | 0 | 1 | 768 | 1 | 793 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002533901.1 | 0 | 10 | 768 | 6 | 797 | galactolipid galactosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2l7c_A | 0.003 | 517 | 535 | 1 | 19 | A Chain A, Biophysical Studies Of Lipid Interacting Regions Of Dgd2 In Arabidopsis Thaliana |
| Metabolic Pathways | |||
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| Pathway Name | Reaction | EC | Protein Name |
| glycolipid biosynthesis | RXN-1225 | EC-2.4.1.241 | digalactosyldiacylglycerol synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO795393 | 404 | 368 | 769 | 0 |
| GO850017 | 334 | 288 | 621 | 0 |
| GO850146 | 328 | 348 | 675 | 0 |
| GO871962 | 321 | 293 | 613 | 0 |
| GO876235 | 345 | 296 | 638 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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