| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.T019200.1 |
| Family | GH1 |
| Protein Properties | Length: 549 Molecular Weight: 63033.4 Isoelectric Point: 5.831 |
| Chromosome | Chromosome/Scaffold: 27 Start: 312489 End: 315308 |
| Description | beta glucosidase 12 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH1 | 9 | 294 | 0 |
| RNSFPDDFVFGTSSSAYQYEGETNKHGRGPAIWDTFTVEHTERINDHSNGNVAVDFYHRYKEDVQRMKEMGMDAFRFSISWSRVLPHGRLSAGVNEEGIK FYNDLIDDLLKNGLQPYVTLFHWDTPQALEDKYGGFLSPNIVNDFRDFVDLCFQNFGDRVKKWITLNEPWMFSVQGYDMGTMAPGRISVVVNDPHRSLNT GATEVYMVSHHLLLAHAAAVKLYKEKYQSCQGGQIGITLVSHWFEPYSNSEADQNATKRSLDFMLGWFMDPLTNGDYPRNMHDFVG | |||
| GH1 | 296 | 514 | 0 |
| RSLDFMLGWFMDPLTNGDYPRNMHDFVGGRLPEFTAEESKMLKGSYDFIGINYYTTYYAQNIDANYQSVGFMSDARANWTGERNGIPIGPQAGVKWLYIY PEGISRLLNYTEDLYGSPTIYITENGVDDVNNNASSLKEALNDPIREKSYKDHLKNVLRSINEHGVDVKGFFAWSLMDNFEWGSGYAVRFGLYYVDYKND LKRYPKQSVKWFKQFLRRD | |||
| Full Sequence |
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| Protein Sequence Length: 549 Download |
| MGSIDDFSRN SFPDDFVFGT SSSAYQYEGE TNKHGRGPAI WDTFTVEHTE RINDHSNGNV 60 AVDFYHRYKE DVQRMKEMGM DAFRFSISWS RVLPHGRLSA GVNEEGIKFY NDLIDDLLKN 120 GLQPYVTLFH WDTPQALEDK YGGFLSPNIV NDFRDFVDLC FQNFGDRVKK WITLNEPWMF 180 SVQGYDMGTM APGRISVVVN DPHRSLNTGA TEVYMVSHHL LLAHAAAVKL YKEKYQSCQG 240 GQIGITLVSH WFEPYSNSEA DQNATKRSLD FMLGWFMDPL TNGDYPRNMH DFVGGRSLDF 300 MLGWFMDPLT NGDYPRNMHD FVGGRLPEFT AEESKMLKGS YDFIGINYYT TYYAQNIDAN 360 YQSVGFMSDA RANWTGERNG IPIGPQAGVK WLYIYPEGIS RLLNYTEDLY GSPTIYITEN 420 GVDDVNNNAS SLKEALNDPI REKSYKDHLK NVLRSINEHG VDVKGFFAWS LMDNFEWGSG 480 YAVRFGLYYV DYKNDLKRYP KQSVKWFKQF LRRDSHSPIP HTYPLITSNE TSKIEDSLVR 540 DAKRPRNA* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02849 | PLN02849 | 2.0e-118 | 5 | 515 | 517 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 8.0e-119 | 4 | 511 | 517 | + beta-glucosidase | ||
| COG2723 | BglB | 2.0e-126 | 9 | 509 | 515 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| TIGR03356 | BGL | 3.0e-144 | 13 | 507 | 499 | + beta-galactosidase. | ||
| pfam00232 | Glyco_hydro_1 | 4.0e-169 | 8 | 513 | 511 | + Glycosyl hydrolase family 1. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002330966.1 | 0 | 1 | 519 | 1 | 489 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330982.1 | 0 | 1 | 548 | 1 | 519 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330983.1 | 0 | 8 | 511 | 1 | 475 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330984.1 | 0 | 1 | 548 | 1 | 519 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002332805.1 | 0 | 8 | 511 | 1 | 475 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ptq_B | 0 | 8 | 513 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 3ptq_A | 0 | 8 | 513 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 3ptm_B | 0 | 8 | 513 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 3ptm_A | 0 | 8 | 513 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| PDB | 3ptk_B | 0 | 8 | 513 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794849 | 498 | 4 | 501 | 0 |
| HO779715 | 476 | 26 | 501 | 0 |
| DT501012 | 238 | 1 | 238 | 0 |
| EE590590 | 512 | 6 | 516 | 0 |
| FG227815 | 509 | 6 | 512 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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