| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s176_127V6.1 |
| Family | CBM49 |
| Protein Properties | Length: 639 Molecular Weight: 70678.8 Isoelectric Point: 6.6423 |
| Chromosome | Chromosome/Scaffold: 176 Start: 847390 End: 852597 |
| Description | glycosyl hydrolase 9C2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM49 | 544 | 623 | 1.9e-23 |
| RVVQKLQEEWSYGGQRYFKYVGSLENSSRHTVSSLTVVIHRLYGPLWGLTPQQTNGNSYTFPSHTKALAPGQKIDFTYIH | |||
| GH9 | 36 | 498 | 0 |
| DYGDALHKSFLFLEAQRSGKLPANQRVNWRGDSGLSDGSSAGVDLVGGYYDAGDNVKFGLPLAFTVTMLSWSVLEYGSQLQSQGQLQYSLDAIKWGTDYL IKAHPSPNFLYGEVGDGDSDHLCWQRPEDMTTSRTAYAITPQRPGSDLAGETAAAMAAASLAFRSSNPSYSDELLLHARQLFTFADTYRGKYDSSIPQAK KYYQSTSGYDDELLWAAVWLHEASREDGYLKYVADNADLLGGTGWGMDQFSWDNKYAGVQLKVTKLLLNGKAGDYTSPFQRYQEKAEYYLCAAIHKNHGL QMPKTPGGMYWIFYWNPMQYVTTAAFLLTVGHDYYSSSGQQLSHCSSPVDNAELLAAGNAQVDYILGNNNRRISYLVGFGENYPQRVHHRASSMVAFNKN SGFIGCKDGYANWYNAQTPNPNLLVGAVVGGPDQNDNFIDQRDAYLMTEPAIYNTAPLVGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 639 Download |
| MRAAEMASTS LNYELQWAFL SIVLTTRSFV SAANFDYGDA LHKSFLFLEA QRSGKLPANQ 60 RVNWRGDSGL SDGSSAGVDL VGGYYDAGDN VKFGLPLAFT VTMLSWSVLE YGSQLQSQGQ 120 LQYSLDAIKW GTDYLIKAHP SPNFLYGEVG DGDSDHLCWQ RPEDMTTSRT AYAITPQRPG 180 SDLAGETAAA MAAASLAFRS SNPSYSDELL LHARQLFTFA DTYRGKYDSS IPQAKKYYQS 240 TSGYDDELLW AAVWLHEASR EDGYLKYVAD NADLLGGTGW GMDQFSWDNK YAGVQLKVTK 300 LLLNGKAGDY TSPFQRYQEK AEYYLCAAIH KNHGLQMPKT PGGMYWIFYW NPMQYVTTAA 360 FLLTVGHDYY SSSGQQLSHC SSPVDNAELL AAGNAQVDYI LGNNNRRISY LVGFGENYPQ 420 RVHHRASSMV AFNKNSGFIG CKDGYANWYN AQTPNPNLLV GAVVGGPDQN DNFIDQRDAY 480 LMTEPAIYNT APLVGVLARL QAGGSTQYAE LNQSAVSAVR SATQQSKIFH GGSHAPHLAF 540 PPVRVVQKLQ EEWSYGGQRY FKYVGSLENS SRHTVSSLTV VIHRLYGPLW GLTPQQTNGN 600 SYTFPSHTKA LAPGQKIDFT YIHHNEEAQI FVGRYTLV* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00759 | Glyco_hydro_9 | 3.0e-170 | 36 | 498 | 465 | + Glycosyl hydrolase family 9. | ||
| PLN00119 | PLN00119 | 9.0e-171 | 20 | 500 | 482 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 19 | 638 | 622 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 6 | 635 | 630 | + endoglucanase | ||
| PLN02420 | PLN02420 | 0 | 16 | 518 | 513 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005576 | extracellular region |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAC94006.1 | 0 | 36 | 637 | 27 | 619 | endo-beta-1,4-glucanase [Fragaria x ananassa] |
| RefSeq | XP_001759537.1 | 0 | 20 | 632 | 7 | 610 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001772307.1 | 0 | 30 | 632 | 21 | 618 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001774444.1 | 0 | 6 | 638 | 1 | 622 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002270880.1 | 0 | 19 | 637 | 14 | 628 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 35 | 504 | 3 | 432 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1ksc_A | 0 | 35 | 504 | 3 | 432 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
| PDB | 1ks8_A | 0 | 35 | 504 | 3 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 35 | 553 | 4 | 489 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 35 | 553 | 4 | 489 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO783495 | 378 | 40 | 417 | 0 |
| BJ591171 | 180 | 460 | 639 | 0 |
| ES821522 | 324 | 39 | 362 | 0 |
| DY287831 | 331 | 34 | 364 | 0 |
| GT742042 | 326 | 171 | 496 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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