| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s266_31V6.1 |
| Family | AA2 |
| Protein Properties | Length: 468 Molecular Weight: 51692.2 Isoelectric Point: 7.9549 |
| Chromosome | Chromosome/Scaffold: 266 Start: 337371 End: 339341 |
| Description | Peroxidase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA2 | 103 | 252 | 1.7e-21 |
| SVRLSGGPFYTVAAGRRDGVVSKASEAVAALPRTKMNVDQLKANFASNGLDLDDMITLSGAHTLGETACVHLDDRIYKYPSPSGVDPNIPKDFLDKLKKK CDKPGLTKKKFDLDTSTSAKFDGKYYSNLMSRRGTLQSDQVLYDDARTRY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 468 Download |
| MTSYSIITVT VLAMTLLMCS GISALREEFY STSCPIYKKM QELVVDEEDL PAYILRLFFH 60 DCFVRGCDAS VLLAGLGTER TAAPNARLDG FDALEVIKAK LRSVRLSGGP FYTVAAGRRD 120 GVVSKASEAV AALPRTKMNV DQLKANFASN GLDLDDMITL SGAHTLGETA CVHLDDRIYK 180 YPSPSGVDPN IPKDFLDKLK KKCDKPGLTK KKFDLDTSTS AKFDGKYYSN LMSRRGTLQS 240 DQVLYDDART RYRLGNIKPL EGSEGQIRLR CSYVNSAPAC VQAGHLEKAF DYFSKMKAAG 300 VRPNAVTYNS LLRRHRNYGT LPEVQRALAL YEEMREAGHV PNDFILQELI KEWVEGLSNP 360 SSFVASGDAG LMKFSEAVLQ KVAVDARREA EDNRHMTIDL HGLTKGEARA AVLVVLRAIK 420 ERYLHGIPVE DDLIIITGIG NHSETKGKLQ EVVEIPVVQR TRSCENP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13041 | PPR_2 | 2.0e-8 | 279 | 313 | 35 | + PPR repeat family. This repeat has no known function. It is about 35 amino acids long and is found in up to 18 copies in some proteins. The family appears to be greatly expanded in plants and fungi. The repeat has been called PPR. | ||
| pfam00141 | peroxidase | 2.0e-39 | 36 | 165 | 150 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 5.0e-51 | 1 | 275 | 325 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 1.0e-90 | 25 | 274 | 298 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF08084.1 | 0 | 1 | 276 | 3 | 314 | class III peroxidase [Triticum aestivum] |
| GenBank | ACU20183.1 | 0 | 4 | 275 | 7 | 325 | unknown [Glycine max] |
| GenBank | ACU20434.1 | 0 | 26 | 275 | 33 | 321 | unknown [Glycine max] |
| RefSeq | XP_001761216.1 | 0 | 29 | 275 | 33 | 317 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001783158.1 | 0 | 24 | 276 | 35 | 340 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1qo4_A | 0 | 25 | 275 | 3 | 304 | A Chain A, Unusual Structural Features In The Parallel Beta-Helix In Pectate Lyases |
| PDB | 1pa2_A | 0 | 25 | 275 | 3 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 4a5g_B | 1.4013e-45 | 24 | 277 | 3 | 307 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 4a5g_A | 1.4013e-45 | 24 | 277 | 3 | 307 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3hdl_A | 2.00386e-43 | 25 | 276 | 2 | 304 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
