| Basic Information | |
|---|---|
| Species | Physcomitrella patens |
| Cazyme ID | Pp1s284_2V6.1 |
| Family | GH17 |
| Protein Properties | Length: 378 Molecular Weight: 40656.6 Isoelectric Point: 4.7088 |
| Chromosome | Chromosome/Scaffold: 284 Start: 16854 End: 18092 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH17 | 54 | 373 | 0 |
| IGIGYGTSGDNLPPTEQVVQFLKTLNVTKVKIYNTDANVIRAFANSGMDLSITVPNGDIIHMATDMTFTQNWVIYNLQPFVPATTITTIAVGNEILTSDT ADTDNLVPAMVNLHSALVTAGLGDIKVSTPHAFSVLNVSFPPSASVFRPSFAASVMKPLLDFLNQTGSPFMVNIFPFFSYMFNYNTINLDYALLNPNAPP VNDPGNGKIYTNLWDAQIDAIISAMASLGHPSIPIVVTESGWPSVGDVTQVGPSVANAQTYNNNLVKLVLADPPKGTPLRPGVATPTYIFSLFNENLKTG KITEKNWGLFHPDMSPVYTA | |||
| Full Sequence |
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| Protein Sequence Length: 378 Download |
| MVVPIWMLWK CPFRGLDNVD VTCSLERRVS GNGGTVPLFS LFAIDSLCID AATIGIGYGT 60 SGDNLPPTEQ VVQFLKTLNV TKVKIYNTDA NVIRAFANSG MDLSITVPNG DIIHMATDMT 120 FTQNWVIYNL QPFVPATTIT TIAVGNEILT SDTADTDNLV PAMVNLHSAL VTAGLGDIKV 180 STPHAFSVLN VSFPPSASVF RPSFAASVMK PLLDFLNQTG SPFMVNIFPF FSYMFNYNTI 240 NLDYALLNPN APPVNDPGNG KIYTNLWDAQ IDAIISAMAS LGHPSIPIVV TESGWPSVGD 300 VTQVGPSVAN AQTYNNNLVK LVLADPPKGT PLRPGVATPT YIFSLFNENL KTGKITEKNW 360 GLFHPDMSPV YTASLST* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-5 | 82 | 366 | 292 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 6.0e-102 | 54 | 371 | 319 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD26909.1 | 0 | 50 | 377 | 21 | 346 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
| GenBank | AAM66024.1 | 0 | 50 | 376 | 23 | 347 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_178637.2 | 0 | 50 | 377 | 21 | 346 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_001757144.1 | 0 | 53 | 377 | 31 | 345 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_001780679.1 | 0 | 50 | 377 | 10 | 337 | predicted protein [Physcomitrella patens subsp. patens] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghs_B | 0 | 54 | 371 | 1 | 302 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 54 | 371 | 1 | 302 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 2cyg_A | 0 | 54 | 375 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghr_A | 0 | 54 | 371 | 1 | 302 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1aq0_B | 0 | 54 | 371 | 1 | 302 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CO164080 | 297 | 58 | 352 | 0 |
| CV145152 | 287 | 80 | 365 | 0 |
| DY269969 | 317 | 50 | 365 | 0 |
| CK272869 | 311 | 58 | 366 | 0 |
| DT574357 | 285 | 51 | 334 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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