Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s306_39V6.1 |
Family | AA2 |
Protein Properties | Length: 337 Molecular Weight: 36725.7 Isoelectric Point: 5.8375 |
Chromosome | Chromosome/Scaffold: 306 Start: 171069 End: 173178 |
Description | peroxidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 42 | 305 | 0 |
SIVKEEVQKAVEAEKRMAASLIRLHFHDCFVNGCDGSLLLDDPILGGTGEKLSRSNLNSTRGFEVIDTIKTRLESACPNTVSCADLLAIAARDSAVQVGL TDTYPVYFGRRDSLTASIDEANLRLPTPNSNYSVLKANFEFQGLDETDLIALSGAHTIGRVRCIVITVSNSSTDPNINAAFRDTLIKACDTANGTIDPPL QNLDVKTPDKFDNNYFKNLRRGEGVLTSDQTLQSTPGPNVGIVKDFAKNKENFFTQYGLSSIKM |
Full Sequence |
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Protein Sequence Length: 337 Download |
MAISRARARV VVALILVKFV ILVNAQVLTT EFYDESCPEI YSIVKEEVQK AVEAEKRMAA 60 SLIRLHFHDC FVNGCDGSLL LDDPILGGTG EKLSRSNLNS TRGFEVIDTI KTRLESACPN 120 TVSCADLLAI AARDSAVQVG LTDTYPVYFG RRDSLTASID EANLRLPTPN SNYSVLKANF 180 EFQGLDETDL IALSGAHTIG RVRCIVITVS NSSTDPNINA AFRDTLIKAC DTANGTIDPP 240 LQNLDVKTPD KFDNNYFKNL RRGEGVLTSD QTLQSTPGPN VGIVKDFAKN KENFFTQYGL 300 SSIKMGYIRP LTGDQGEIRK NCRAVNSAPS SLVAYQ* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00314 | plant_peroxidase_like | 7.0e-26 | 57 | 306 | 280 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 4.0e-55 | 57 | 199 | 143 | + Peroxidase. | ||
PLN03030 | PLN03030 | 5.0e-61 | 22 | 326 | 318 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 1.0e-127 | 28 | 325 | 304 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACM47317.1 | 0 | 1 | 326 | 1 | 324 | peroxidase [Capsicum annuum] |
EMBL | CAH10840.1 | 0 | 11 | 326 | 11 | 320 | peroxidase [Picea abies] |
RefSeq | XP_001781554.1 | 0 | 7 | 329 | 5 | 321 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781580.1 | 0 | 1 | 336 | 1 | 336 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002520835.1 | 0 | 9 | 326 | 8 | 318 | Peroxidase 52 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 28 | 328 | 3 | 306 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly |
PDB | 1pa2_A | 0 | 28 | 328 | 3 | 306 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1sch_B | 0 | 28 | 326 | 2 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1sch_A | 0 | 28 | 326 | 2 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1fhf_C | 0 | 28 | 326 | 2 | 303 | A Chain A, The Structure Of Soybean Peroxidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
betanidin degradation | RXN-8635 | EC-1.11.1.7 | peroxidase |
Signal Peptide | |||||
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Cleavage Site | |||||
25 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BJ968441 | 247 | 1 | 247 | 0 |
BJ968377 | 242 | 1 | 242 | 0 |
BY992453 | 241 | 1 | 241 | 0 |
BJ968985 | 226 | 1 | 226 | 0 |
BY992506 | 225 | 1 | 225 | 0 |
Orthologous Group | |||||
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Species | ID | ||||
Physcomitrella patens | Pp1s306_37V6.1 | Pp1s60_103V6.1 |
Sequence Alignments (This image is cropped. Click for full image.) |
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