PlantCAZyme

Basic Information
Species	Physcomitrella patens
Cazyme ID	Pp1s334_77V6.1
Family	GH17
Protein Properties	Length: 404 Molecular Weight: 45196.9 Isoelectric Point: 10.2382
Chromosome	Chromosome/Scaffold: 334 Start: 389011 End: 390294
Description	O-Glycosyl hydrolases family 17 protein
View CDS

External Links
NCBI Taxonomy
Plaza
CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GH17	98	400	0
GINVGRVGDNLPGPGRIVELLQRRKVRIYDADLKMLTAFKGSGIKVTVAVPNDAVATVASSQQEADRWVRTHVKPFVSFIDRIAVGNEWLHGHKRDVSPL VLAMQNIHRSLVKLSLSKIKVTTPHAFDAIGFPPSKGRFPYPADMKRILNLLQTTKSAFTLNVYPFFAYKVNANVNREYAVFNPNSNHVIDMGRRYTNLF DAQVDTHRSAMAAIGYPDFPLVIGETGWPSAGSNARGVNIQDAQTYNNNLVKHELSSEGTPMRRNVRMPTYIFALFNENLKGGGIENNWGLYHPNMTPVY SIN

Full Sequence
Protein Sequence Length: 404 Download
MPPFRKIGDI FPRTINAHSV VTVPSAQLLH TLLPTRQWCR LRSLNWLRIC LLIERGVLDT 60 GELSVVDHRH GYRERDCACG YSFGGRRCTR FHCGCNGGIN VGRVGDNLPG PGRIVELLQR 120 RKVRIYDADL KMLTAFKGSG IKVTVAVPND AVATVASSQQ EADRWVRTHV KPFVSFIDRI 180 AVGNEWLHGH KRDVSPLVLA MQNIHRSLVK LSLSKIKVTT PHAFDAIGFP PSKGRFPYPA 240 DMKRILNLLQ TTKSAFTLNV YPFFAYKVNA NVNREYAVFN PNSNHVIDMG RRYTNLFDAQ 300 VDTHRSAMAA IGYPDFPLVI GETGWPSAGS NARGVNIQDA QTYNNNLVKH ELSSEGTPMR 360 RNVRMPTYIF ALFNENLKGG GIENNWGLYH PNMTPVYSIN LSV*

Full Sequence

Protein Sequence Length: 404 Download

MPPFRKIGDI FPRTINAHSV VTVPSAQLLH TLLPTRQWCR LRSLNWLRIC LLIERGVLDT    60
GELSVVDHRH GYRERDCACG YSFGGRRCTR FHCGCNGGIN VGRVGDNLPG PGRIVELLQR    120
RKVRIYDADL KMLTAFKGSG IKVTVAVPND AVATVASSQQ EADRWVRTHV KPFVSFIDRI    180
AVGNEWLHGH KRDVSPLVLA MQNIHRSLVK LSLSKIKVTT PHAFDAIGFP PSKGRFPYPA    240
DMKRILNLLQ TTKSAFTLNV YPFFAYKVNA NVNREYAVFN PNSNHVIDMG RRYTNLFDAQ    300
VDTHRSAMAA IGYPDFPLVI GETGWPSAGS NARGVNIQDA QTYNNNLVKH ELSSEGTPMR    360
RNVRMPTYIF ALFNENLKGG GIENNWGLYH PNMTPVYSIN LSV* 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
COG5309	COG5309	3.0e-5	116	389	292	+ Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]
pfam00332	Glyco_hydro_17	6.0e-90	98	400	315	+ Glycosyl hydrolases family 17.

Gene Ontology
GO Term	Description
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975	carbohydrate metabolic process

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
RefSeq	XP_001757143.1	0	98	403	2	313	predicted protein [Physcomitrella patens subsp. patens]
RefSeq	XP_001757144.1	0	83	401	15	343	predicted protein [Physcomitrella patens subsp. patens]
RefSeq	XP_001780679.1	0	98	402	15	336	predicted protein [Physcomitrella patens subsp. patens]
RefSeq	XP_001782548.1	0	98	403	29	305	predicted protein [Physcomitrella patens subsp. patens]
RefSeq	XP_001782572.1	0	65	403	8	346	predicted protein [Physcomitrella patens subsp. patens]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1ghs_B	0	98	401	2	306	A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities
PDB	1ghs_A	0	98	401	2	306	A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities
PDB	1ghr_A	0	98	401	2	306	A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities
PDB	1aq0_B	0	98	401	2	306	A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group
PDB	1aq0_A	0	98	401	2	306	A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group

EST Download unfiltered results here

Hit	Length	Start	End	EValue
DR069678	291	98	378	0
CO166038	284	126	402	0
DR388784	284	126	402	0
EX358649	296	98	380	0
CV145152	282	122	391	0

Orthologous Group
Species	ID
Physcomitrella patens	Pp1s334_43V6.1	Pp1s447_13V6.1
Selaginella moellendorffii	102512	121433	403265	163389	440863

CAZyme Information