| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb05g003730.1 |
| Family | GT4 |
| Protein Properties | Length: 742 Molecular Weight: 82838.2 Isoelectric Point: 7.4965 |
| Chromosome | Chromosome/Scaffold: 5 Start: 4300035 End: 4304461 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 485 | 587 | 2.9e-21 |
| AYFLGKMVWAKGYRELIDLFAKHKSDLEGFKLDIYGNGEDSHEVQSAARKLNLNLNFHKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCA DHP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 742 Download |
| MASFGVDTRP AAAASGGGGG AGTTGEGALS FLSRGLREDL RLIRARAEEL ETFLSAPVPE 60 PELFARLRRA YSSSASSART RLDLSAIGKA FEADAWSGAR AARWRWEAEE AEEWEPVRMV 120 KARLRELERR TQAQSPSDML HKLKLSLKSM TFAPETSEDV PPLDLGELLA YFVKQSVPLF 180 DQLGIKRDVC DKLVESLCSK RKDHPAYRFL SESEPSSLRN DNVGDELDLR IASVLQSTGH 240 HYEGGFWSDG PKSDISGKRH VAIVTTASLP WMTGTAVNPL FRAAYLAKSS KQDVTLVVPW 300 LCKSDQELVY PNSMTFSSPQ EQETYMRNWL EERVGFKTDF KISFYPGKFQ KERRSIIPAG 360 DTSQFIPSKE ADIAILEEPE HLNWYHHGKR WTDKFNHVVG VVHTNYLEYI KREKNGAIQA 420 FFVKHINNLV ARAYCHKILR LSGATQDLPK SMICNVHGVN PKFLEVGERI AAERESGQQS 480 FSKGAYFLGK MVWAKGYREL IDLFAKHKSD LEGFKLDIYG NGEDSHEVQS AARKLNLNLN 540 FHKGRDHADD SLHGYKVFIN PSISDVLCTA TAEALAMGKF VVCADHPSND FFRSFPNCLT 600 YKTSEDFVAR VKEAMTRDPQ PLTPEQRYDL SWEAATQRFM EHSELDKVLN SDSSSECTSS 660 VTTESGKSRD TRMRRSASAP NMSDVVDGGL AFVHYCFTGS ELLRLSTGAV PEPGTTTSSI 720 AWTSTSHRPR YRTRSTAGSN S* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00534 | Glycos_transf_1 | 2.0e-10 | 487 | 616 | 137 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
| COG0438 | RfaG | 1.0e-11 | 259 | 641 | 399 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| PLN02501 | PLN02501 | 0 | 116 | 711 | 603 | + digalactosyldiacylglycerol synthase | ||
| PLN02846 | PLN02846 | 0 | 258 | 711 | 454 | + digalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA91566.1 | 0 | 1 | 711 | 1 | 709 | digalactosyldiacylglycerol synthase 1, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ACN33383.1 | 0 | 1 | 711 | 1 | 712 | unknown [Zea mays] |
| GenBank | ACR36796.1 | 0 | 119 | 711 | 1 | 593 | unknown [Zea mays] |
| RefSeq | NP_001065806.1 | 0 | 1 | 711 | 1 | 709 | Os11g0158400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002449031.1 | 0 | 1 | 741 | 1 | 741 | hypothetical protein SORBIDRAFT_05g003730 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2l7c_A | 0.003 | 479 | 497 | 1 | 19 | A Chain A, Biophysical Studies Of Lipid Interacting Regions Of Dgd2 In Arabidopsis Thaliana |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| glycolipid biosynthesis | RXN-1225 | EC-2.4.1.241 | digalactosyldiacylglycerol synthase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO795393 | 383 | 330 | 711 | 0 |
| GO876235 | 353 | 250 | 600 | 0 |
| GO850017 | 326 | 258 | 583 | 0 |
| GO850146 | 328 | 310 | 637 | 0 |
| GO869936 | 322 | 390 | 711 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |