| Basic Information | |
|---|---|
| Species | Sorghum bicolor |
| Cazyme ID | Sb09g018145.1 |
| Family | GH1 |
| Protein Properties | Length: 188 Molecular Weight: 21052.6 Isoelectric Point: 4.5431 |
| Chromosome | Chromosome/Scaffold: 9 Start: 45536485 End: 45538431 |
| Description | beta glucosidase 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH1 | 17 | 115 | 2.4e-26 |
| QYEGAAADDGRIPAIWETGTHTPIQDDVKLMSDIALGSYRFTISCGRGAVNPEGLQFYNNLIDELMKAGIQINAVLYHIDLPQILEDQYSGWVSPKIIS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 188 Download |
| YEIAAAEDGR TNIFLLQYEG AAADDGRIPA IWETGTHTPI QDDVKLMSDI ALGSYRFTIS 60 CGRGAVNPEG LQFYNNLIDE LMKAGIQINA VLYHIDLPQI LEDQYSGWVS PKIISYPFGT 120 SNCTVGNSTT EPYLFVHHSL LAHAYASTVR LYRQNYQAKQ KGTIGLNMYT IWLYPFTDSA 180 EDIEATER 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00232 | Glyco_hydro_1 | 3.0e-34 | 17 | 188 | 229 | + Glycosyl hydrolase family 1. | ||
| TIGR03356 | BGL | 2.0e-35 | 17 | 188 | 229 | + beta-galactosidase. | ||
| PLN02998 | PLN02998 | 2.0e-40 | 17 | 188 | 239 | + beta-glucosidase | ||
| PLN02849 | PLN02849 | 8.0e-44 | 17 | 188 | 235 | + beta-glucosidase | ||
| PLN02814 | PLN02814 | 1.0e-49 | 17 | 188 | 235 | + beta-glucosidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS79738.1 | 0 | 16 | 188 | 52 | 290 | putative beta-glucosidase [Oryza sativa Japonica Group] |
| GenBank | EEC79145.1 | 0 | 16 | 188 | 52 | 290 | hypothetical protein OsI_19808 [Oryza sativa Indica Group] |
| GenBank | EEE63444.1 | 0 | 16 | 188 | 52 | 290 | hypothetical protein OsJ_18257 [Oryza sativa Japonica Group] |
| RefSeq | NP_001055327.1 | 0 | 16 | 188 | 62 | 300 | Os05g0365600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002439660.1 | 0 | 1 | 188 | 1 | 188 | hypothetical protein SORBIDRAFT_09g018145 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ptq_B | 3e-36 | 17 | 188 | 48 | 288 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3ptq_A | 3e-36 | 17 | 188 | 48 | 288 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3ptm_B | 3e-36 | 17 | 188 | 48 | 288 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3ptm_A | 3e-36 | 17 | 188 | 48 | 288 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3ptk_B | 3e-36 | 17 | 188 | 48 | 288 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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