Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si020148m |
Family | GT4 |
Protein Properties | Length: 850 Molecular Weight: 96892.9 Isoelectric Point: 7.3601 |
Chromosome | Chromosome/Scaffold: 1 Start: 41988015 End: 41991404 |
Description | sucrose synthase 6 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 571 | 738 | 0 |
EDRSKPVIFSMARLDKVKNITGLVEWYGQNKRLRDLVNLVVVGGLLDPSQSKDREEIEEINKMHSLINKYQLKGQIRWIRAQTDRVRNGELYRCIADTKG AFVQPAFYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDEVSGFHINPLDGKKASNKIADFFQKCKED |
Full Sequence |
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Protein Sequence Length: 850 Download |
MDGLMRRSDS IADMMPEALR QSRYHMKRCF QRYVAGGSRL MKKTQLLEEL HRSAEDGRIH 60 KDRLAEGFLG YVISSTHEAV VLPPLVNFAV RTNPGIWEYI KVHSADLTVD QITPSQYLKC 120 KEMLYDHQWA QDDNSLEVDF GALDDLSTPR LTLPSSIGNG MHFVSRFMSS KLAGTTMSMK 180 PLLDYLLALT HRGHDLMVNA TLDTVSKLQT ALLHADVFLA GLHGDTPYQK FEHKFQEWGL 240 ERGWGHTAEA CRETISCLSE VLQAPDPTNM DSFFSRVPSL FSIVIFSIHG YFGQEKVLGL 300 PDTGGQVVYI LDQVRALEDE LLQRINQQGL HFTPRILVLT RLIPEAKGTK CNVELEPIHN 360 TRHSTILRVP FKTEDGQDLP HWVSRFDIYP YLERYAEDSC AKILETLQGK PDLVIGNYTD 420 GNLVASLVSR KLGVTQGTIA HALEKTKYED SDVKWREMDR KYHFSCQFTA DMIAMNTSDF 480 IIASTYQEIA GSKEKPGQYE SHYAFTMPGR CRFATGINVF DPKFNIAAPG ADQSVYFPFT 540 LKQKRLTDLH PQIEELVYSK EDNDEHIGYL EDRSKPVIFS MARLDKVKNI TGLVEWYGQN 600 KRLRDLVNLV VVGGLLDPSQ SKDREEIEEI NKMHSLINKY QLKGQIRWIR AQTDRVRNGE 660 LYRCIADTKG AFVQPAFYEA FGLTVIEAMN CGLPTFATNQ GGPAEIIVDE VSGFHINPLD 720 GKKASNKIAD FFQKCKEDPM YWNKISTAGL QRIYECYTWQ IYATKVLNMG SMYGFWRTMD 780 KEERQAKQRY LQMFYNLQFR KLAKAVPKVG ERPEQPTAAT VPDRLVSRPK ERQVCPLLRN 840 LLKKEQGSC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 4.0e-53 | 283 | 769 | 494 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 3.0e-104 | 283 | 767 | 485 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 1 | 817 | 817 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 23 | 807 | 786 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 7 | 559 | 553 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAE03896.2 | 0 | 5 | 847 | 7 | 848 | OSJNBb0026I12.4 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAH66603.1 | 0 | 5 | 847 | 7 | 848 | H0211A12.6 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC76883.1 | 0 | 5 | 847 | 7 | 848 | hypothetical protein OsI_15088 [Oryza sativa Indica Group] |
GenBank | EEE60617.1 | 0 | 5 | 833 | 7 | 826 | hypothetical protein OsJ_14034 [Oryza sativa Japonica Group] |
RefSeq | NP_001048620.1 | 0 | 5 | 848 | 5 | 845 | Os02g0831500 [Oryza sativa (japonica cultivar-group)] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 4 | 807 | 7 | 803 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3s29_G | 0 | 4 | 807 | 7 | 803 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3s29_F | 0 | 4 | 807 | 7 | 803 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3s29_E | 0 | 4 | 807 | 7 | 803 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 3s29_D | 0 | 4 | 807 | 7 | 803 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
galactose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
sucrose degradation III | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
UDP-glucose biosynthesis (from sucrose) | SUCROSE-SYNTHASE-RXN | EC-2.4.1.13 | sucrose synthase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794519 | 803 | 5 | 807 | 0 |
BU103683 | 806 | 2 | 807 | 0 |
CX109054 | 602 | 103 | 704 | 0 |
FG227316 | 455 | 280 | 734 | 0 |
GO872338 | 325 | 508 | 832 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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