y
Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10004013m |
Family | CBM43 |
Protein Properties | Length: 517 Molecular Weight: 55831.6 Isoelectric Point: 6.3425 |
Chromosome | Chromosome/Scaffold: 6 Start: 7653396 End: 7656685 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 377 | 458 | 9.8e-32 |
CIAKEKVDKKMLQAALDWACGPGKVDCSALMQGEACYEPDDVVAHSTYAFNAYYQKMGKASGSCDFKGVATVTTTDPSRGTC | |||
GH17 | 39 | 358 | 0 |
IGVNIGTEVTNMPSPTQVVTLLKSQNINRVRLYDADRSMLLAFAHTGIQVIISVPNDQLLGISQSNATAANWVTRNVAAYYPATNITTIAVGSEVLTTLP NAASVLVSALKYIQSALITANLDRQIKVSTPHSSTIILDSFPPSQAFFNKTWDPVIVPLLKFLQSTGSPLMLNVYPYFDYVQSNGVIPLDYALFQPLQAN KEAVDANTLLHYTNVFDAIVDAAYFAMSYLNFTNIPIVVTESGWPSKGDAKEHDATVENANTYNSNLIQHVINKTGTPKHPGTAVTTYIYELYNEDTRPG PVSEKNWGLFHTNGTPVYTL |
Full Sequence |
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Protein Sequence Length: 517 Download |
MLQKQIKASP RFEAPSMAAL LLLFLFLFAS SALSQDSLIG VNIGTEVTNM PSPTQVVTLL 60 KSQNINRVRL YDADRSMLLA FAHTGIQVII SVPNDQLLGI SQSNATAANW VTRNVAAYYP 120 ATNITTIAVG SEVLTTLPNA ASVLVSALKY IQSALITANL DRQIKVSTPH SSTIILDSFP 180 PSQAFFNKTW DPVIVPLLKF LQSTGSPLML NVYPYFDYVQ SNGVIPLDYA LFQPLQANKE 240 AVDANTLLHY TNVFDAIVDA AYFAMSYLNF TNIPIVVTES GWPSKGDAKE HDATVENANT 300 YNSNLIQHVI NKTGTPKHPG TAVTTYIYEL YNEDTRPGPV SEKNWGLFHT NGTPVYTLRL 360 AGAGAILAND TTNQTFCIAK EKVDKKMLQA ALDWACGPGK VDCSALMQGE ACYEPDDVVA 420 HSTYAFNAYY QKMGKASGSC DFKGVATVTT TDPSRGTCVF PGSAKSNQTL GNNTTALAPS 480 ANSTTSGCIP QYYHPHASFT DLTLLSLLLI IALVFL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-5 | 58 | 351 | 304 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-20 | 375 | 447 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-39 | 375 | 460 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-99 | 39 | 358 | 320 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001077866.1 | 0 | 30 | 404 | 14 | 388 | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] |
RefSeq | NP_565269.1 | 0 | 30 | 516 | 14 | 501 | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] |
RefSeq | XP_002312452.1 | 0 | 36 | 516 | 1 | 479 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002314794.1 | 0 | 22 | 510 | 1 | 488 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527772.1 | 0 | 17 | 479 | 1 | 462 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 39 | 358 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 39 | 360 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 39 | 360 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 39 | 360 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 39 | 360 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |