| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10006375m |
| Family | GH17 |
| Protein Properties | Length: 406 Molecular Weight: 45112.1 Isoelectric Point: 8.6127 |
| Chromosome | Chromosome/Scaffold: 19 Start: 2159336 End: 2160553 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 40 | 351 | 0 |
| VPISPEKIAAKVVAMNIQAVRLLDSNPEMIRAFAGTNVAIFLSIPNPMVPLLASNLSFASLWVYHNVFAFYPRTKISVISVGDDVISSYSPDDPPLFLLR AMQNVQKSLENLGIFKISVSTTFSFSSIVPKAFPPSSAQFEQGNGEAIIRPILQFLERTNSSFMIKIDPYQMYRSSSSITIGFAIFETSRFNFREDLATG VRYHNLFDMMVDAVISSMAVMGHENIPVIVAETGWPSSGIDAGEIDATPYYSGQFLRSLIGHLRRGSGTPLRKGGPSEVYIFELVDKYDPEQPVTSRNWG ILDHSLTDKYQL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 406 Download |
| MQSNLLLLLI SITAIAISST TSATTIGVTY SNPAPIYGSV PISPEKIAAK VVAMNIQAVR 60 LLDSNPEMIR AFAGTNVAIF LSIPNPMVPL LASNLSFASL WVYHNVFAFY PRTKISVISV 120 GDDVISSYSP DDPPLFLLRA MQNVQKSLEN LGIFKISVST TFSFSSIVPK AFPPSSAQFE 180 QGNGEAIIRP ILQFLERTNS SFMIKIDPYQ MYRSSSSITI GFAIFETSRF NFREDLATGV 240 RYHNLFDMMV DAVISSMAVM GHENIPVIVA ETGWPSSGID AGEIDATPYY SGQFLRSLIG 300 HLRRGSGTPL RKGGPSEVYI FELVDKYDPE QPVTSRNWGI LDHSLTDKYQ LLGLKDSETI 360 FAILLTVLEI FFYLALFMIA SHRFIGWYIR RNDPPRPIRR HVRRN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 5.0e-6 | 264 | 341 | 80 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 3.0e-46 | 48 | 351 | 310 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAT40508.1 | 0 | 44 | 377 | 49 | 395 | Glycosyl hydrolases family 17 protein [Solanum demissum] |
| RefSeq | NP_191137.1 | 0 | 26 | 351 | 31 | 351 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002276218.1 | 0 | 20 | 351 | 26 | 353 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316237.1 | 0 | 45 | 379 | 62 | 391 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530412.1 | 0 | 23 | 349 | 31 | 351 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 3e-40 | 26 | 351 | 3 | 312 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3ur8_A | 3e-40 | 26 | 351 | 3 | 312 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
| PDB | 3ur7_B | 3e-40 | 26 | 351 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 3e-40 | 26 | 351 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 2e-39 | 26 | 351 | 3 | 312 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
