| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10013121m |
| Family | AA7 |
| Protein Properties | Length: 567 Molecular Weight: 62200.6 Isoelectric Point: 7.1852 |
| Chromosome | Chromosome/Scaffold: 2 Start: 1998847 End: 2004130 |
| Description | FAD-linked oxidases family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA7 | 144 | 338 | 3.3e-26 |
| IPDVVVFPRSEEQVSKILKSCNEYKVPIVPYGGATSIEGHTLAPKGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELNEHLEQYGLFFPLDPGPGATI GGMCATRCSGSLAVRYGTMRDNVISLKVVLPNGDVVKTASRARKSAAGYDLTRLIIGSEGTLGVITEVTLRLQKIPQHSVVAVCNFPTVKDAADV | |||
| Full Sequence |
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| Protein Sequence Length: 567 Download |
| MALSSWLGRS RFSSKTVSAF LRPCRRKLQS TAKTADELTA VSTKKGRRNW WSSSALVPLA 60 MAASATTFAF LNQSQPSISE SSARDITIGG KDSTELVVKG EYNEVPKELI SELKIILEDN 120 LTTDYDERYF HGKPQNSFHK SVNIPDVVVF PRSEEQVSKI LKSCNEYKVP IVPYGGATSI 180 EGHTLAPKGG VCIDMSLMKS VKALHVEDMD VVVEPGIGWL ELNEHLEQYG LFFPLDPGPG 240 ATIGGMCATR CSGSLAVRYG TMRDNVISLK VVLPNGDVVK TASRARKSAA GYDLTRLIIG 300 SEGTLGVITE VTLRLQKIPQ HSVVAVCNFP TVKDAADVAI ATMMSGIQVS RVELLDEVQI 360 RALNMANGKK LNEVPTLMFE FIGTEAYARE QTRIVQEIAS KHNGSDFVFA EEPEAKKELW 420 KIRKEALWAC YAMAPGHEAM ITDVCVPLSH LAELISRSKK ELDASQLLCT VIAHAGDGNF 480 HTCIMFDPTN EEQRREAERL NHFMVHSALS MNGTCTGEHG VGTGKMKYLE KELGIEALQT 540 MKRIKKALDP NDIMNPGKLI PPHVCF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11230 | PRK11230 | 2.0e-49 | 144 | 565 | 428 | + glycolate oxidase subunit GlcD; Provisional | ||
| pfam02913 | FAD-oxidase_C | 5.0e-74 | 318 | 559 | 247 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
| TIGR00387 | glcD | 2.0e-93 | 148 | 558 | 417 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
| COG0277 | GlcD | 9.0e-121 | 112 | 562 | 465 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| PLN02805 | PLN02805 | 0 | 14 | 566 | 555 | + D-lactate dehydrogenase [cytochrome] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB11407.1 | 0 | 152 | 566 | 3 | 418 | glycolate oxidase subunit D-like; D-lactate dehydrogenase-like [Arabidopsis thaliana] |
| RefSeq | NP_568170.1 | 0 | 1 | 566 | 1 | 567 | FAD linked oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002267321.1 | 0 | 1 | 566 | 1 | 566 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322755.1 | 0 | 88 | 566 | 1 | 480 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524111.1 | 0 | 1 | 566 | 1 | 555 | d-lactate dehydrogenase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pm9_F | 1e-39 | 147 | 560 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_E | 1e-39 | 147 | 560 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_D | 1e-39 | 147 | 560 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_C | 1e-39 | 147 | 560 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_B | 1e-39 | 147 | 560 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX265038 | 323 | 159 | 480 | 0 |
| EX261606 | 339 | 216 | 550 | 0 |
| DY305587 | 368 | 199 | 566 | 0 |
| EX440808 | 328 | 124 | 451 | 0 |
| EX261606 | 54 | 511 | 563 | 0.29 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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