Basic Information | |
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Species | Thellungiella halophila |
Cazyme ID | Thhalv10013309m |
Family | CBM43 |
Protein Properties | Length: 507 Molecular Weight: 55655.2 Isoelectric Point: 8.109 |
Chromosome | Chromosome/Scaffold: 2 Start: 9768443 End: 9770778 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 369 | 451 | 2.1e-30 |
WCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQLNRATDVACSFGGAGVKVNKDPSYDKC | |||
GH17 | 26 | 346 | 0 |
VGVCYGRSADDLPTPEKVVQLIKQHNIQYVRIYDYNPQVLKAFGNTSIELMIGVPNSDLTAFSQFQSNVDTWLKNSVLPYYPTTKITYITVGAESTDDPH INASSFVVPAMQNVLTALRKVGLSRRIKVSTTLSLGVLSRSFPPSAGAFNSSYAYFLRPMLEFLAEHQSPFMIDLYPYYAYRDSPNNVSLDYVLFESSSE VIDPNTGLLYKNMFDAQVDALYYALTALNFRTIKIMVTETGWPTKGSPKEKAAASPDNAETYNTNIIRHTVTNQGTPAKPGESMNVYIFSLFNENRKSGL DSERNWGLFYPDQTSVYQLDF |
Full Sequence |
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Protein Sequence Length: 507 Download |
MARDFKLIFA ISLLLLLLGY CHGGKVGVCY GRSADDLPTP EKVVQLIKQH NIQYVRIYDY 60 NPQVLKAFGN TSIELMIGVP NSDLTAFSQF QSNVDTWLKN SVLPYYPTTK ITYITVGAES 120 TDDPHINASS FVVPAMQNVL TALRKVGLSR RIKVSTTLSL GVLSRSFPPS AGAFNSSYAY 180 FLRPMLEFLA EHQSPFMIDL YPYYAYRDSP NNVSLDYVLF ESSSEVIDPN TGLLYKNMFD 240 AQVDALYYAL TALNFRTIKI MVTETGWPTK GSPKEKAAAS PDNAETYNTN IIRHTVTNQG 300 TPAKPGESMN VYIFSLFNEN RKSGLDSERN WGLFYPDQTS VYQLDFTGKN SVLRSNSSGT 360 NSSGSGNSWC IASSKASERD LKGALDWACG PGNVDCTAIQ PSQPCFQPDT LVSHASFVFN 420 SYFQLNRATD VACSFGGAGV KVNKDPSYDK CIYISAGGTK SKAMNATGLT SSASTSRGNE 480 LPRWILRLCL VILLLFGLQT LNLQAL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-7 | 256 | 337 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-18 | 369 | 440 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-35 | 369 | 453 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-104 | 26 | 346 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD91576.1 | 0 | 1 | 470 | 1 | 471 | beta-1,3-glucanase [Medicago sativa] |
RefSeq | NP_200470.1 | 0 | 1 | 506 | 1 | 506 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283473.1 | 0 | 1 | 496 | 1 | 493 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002330523.1 | 0 | 21 | 457 | 22 | 455 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514201.1 | 0 | 1 | 486 | 1 | 486 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 346 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 26 | 347 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 26 | 347 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 26 | 347 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 26 | 347 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |