| Basic Information | |
|---|---|
| Species | Thellungiella halophila |
| Cazyme ID | Thhalv10020221m |
| Family | GH51 |
| Protein Properties | Length: 669 Molecular Weight: 73998.3 Isoelectric Point: 5.6731 |
| Chromosome | Chromosome/Scaffold: 13 Start: 5985295 End: 5989922 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 218 | 649 | 0 |
| GSIWIDQVSAMPVDTYKGHGFRNDLFQMMVDIKPRFIRFPGGCFVEGEWLSNAFRWKETVGPWEERPGHFGDVWKYWTDDGLGHFEFFQLAEDIGAAPIW VFNNGISHNDEVETASVMPFVQEALDGIEFARGDANSTWGSVRAAMGRQEPFELKYVAIGNEDCGKTYYKGNYIVFYNAIKKAYPDIKIISNCDGSSRPL DHPADYYDYHIYTSASSLFSMYHQFDRTSRNGPKAFVSEYAVTGKDAGTGSLLAALAEAAFLIGLEKNSDIVEMASYAPLFVNTNDRRWNPDAIVFNSSH LYGTPSYWVQRFFAESSGSTLLASTLKGNSSSLVASAITWQNNGKDYIRIKAVNFGASSVNLKVLVTGLDPNVMKVSGSKKTILTSTNVMDENSFTQPEK VVPHESLLEMAEEDLTVILPPHSFSSFDLLKE | |||
| Full Sequence |
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| Protein Sequence Length: 669 Download |
| MLLMELDDPF LKRFSGYSSR FANVTAFNRF SAIYAIWSNY GLDITVLYAI WSKRLQEINH 60 AGAGGLWAEL VSNRGFEAGG QNTPSNIWPW SIVGDQSSIY VATDRSSLFE RNKIALRMDV 120 LCDSNGCPSG GVGVYNPGYW GMNIEEGKKY KVAFYVRSTG DIDLSVSLTS SNGSLTLASE 180 NIIASASDVS KWTKKEVLLV AKGTDHGARL QLTTSKKGSI WIDQVSAMPV DTYKGHGFRN 240 DLFQMMVDIK PRFIRFPGGC FVEGEWLSNA FRWKETVGPW EERPGHFGDV WKYWTDDGLG 300 HFEFFQLAED IGAAPIWVFN NGISHNDEVE TASVMPFVQE ALDGIEFARG DANSTWGSVR 360 AAMGRQEPFE LKYVAIGNED CGKTYYKGNY IVFYNAIKKA YPDIKIISNC DGSSRPLDHP 420 ADYYDYHIYT SASSLFSMYH QFDRTSRNGP KAFVSEYAVT GKDAGTGSLL AALAEAAFLI 480 GLEKNSDIVE MASYAPLFVN TNDRRWNPDA IVFNSSHLYG TPSYWVQRFF AESSGSTLLA 540 STLKGNSSSL VASAITWQNN GKDYIRIKAV NFGASSVNLK VLVTGLDPNV MKVSGSKKTI 600 LTSTNVMDEN SFTQPEKVVP HESLLEMAEE DLTVILPPHS FSSFDLLKES AKIRMPISDS 660 SSTSSQKV* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 0.002 | 484 | 642 | 177 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| COG3534 | AbfA | 2.0e-30 | 237 | 382 | 146 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 4.0e-37 | 483 | 640 | 168 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 1.0e-44 | 483 | 640 | 166 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK50089.1 | 0 | 55 | 662 | 64 | 671 | AF372949_1 AT3g10740/T7M13_18 [Arabidopsis thaliana] |
| GenBank | AAO92261.1 | 0 | 55 | 662 | 64 | 671 | alpha-L-arabinofuranosidase [Arabidopsis thaliana] |
| RefSeq | NP_187685.1 | 0 | 55 | 662 | 64 | 671 | ASD1 (ALPHA-L-ARABINOFURANOSIDASE 1); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds / xylan 1,4-beta-xylosidase [Arabidopsis thaliana] |
| RefSeq | NP_197984.2 | 0 | 55 | 665 | 63 | 672 | ASD2 (ALPHA-L-ARABINOFURANOSIDASE 2); alpha-N-arabinofuranosidase/ hydrolase, acting on glycosyl bonds [Arabidopsis thaliana] |
| RefSeq | XP_002523672.1 | 0 | 55 | 665 | 61 | 677 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 4e-17 | 237 | 550 | 48 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 4e-17 | 237 | 550 | 48 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 4e-17 | 237 | 550 | 48 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 4e-17 | 237 | 550 | 48 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 4e-17 | 237 | 550 | 48 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO852683 | 414 | 237 | 646 | 0 |
| HO780740 | 394 | 265 | 655 | 0 |
| HO807291 | 318 | 144 | 461 | 0 |
| JG577027 | 333 | 94 | 426 | 0 |
| FY438994 | 281 | 345 | 624 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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