| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20002241m |
| Family | CE1 |
| Protein Properties | Length: 1010 Molecular Weight: 110179 Isoelectric Point: 6.4545 |
| Chromosome | Chromosome/Scaffold: 20 Start: 44891 End: 52939 |
| Description | starch synthase 3 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE1 | 140 | 404 | 4.8e-28 |
| RMLRIWTPPGFSPTSSSPSSSRDPLPVLYLNDGQNLYGDQPTLSGCSWHVGEAAAGLINSGALPPFVVVGIDHAGDKRSYDYLPYRPGTANGYRLDAANW PGGGVEAYLRAVVDEILPYTERTYGVSSEPALRGFGGSSFGGICALCAAMLHPGVFGALLVESPSLWFGEERLLRQDLPSFQGPWPARMFLAMGTKEYSG IRKETLTPEFDSRLVSLTHDLAALLESRGLMRGERLQLVIEEGATHTEAAWAGRLPAALSSLGLH | |||
| CE1 | 745 | 1003 | 1.1e-30 |
| EEKRVRVWTPPGFDPSRPPPGGYPVLYMQDGQNMFEDWLAHQGVSWRVGYTASDLITRGELPPFVVVAVDSVGAMRSLNYLPYPPGTGAGGFRGDAERWP GGGLEAYMGRLVEEIMPLIQQRFAVSSDPAKVAFGGGSFAGVAALYAAMHYPHVFGCVLAESPSLWIAEGRFLQDMRMYRGMLPERLFLGCGTKEYSATR DHDREDVDALLLSYCQEAASILESQGMRGNRLRFLVEEGAGHHELAWQWRLTGAMRFLF | |||
| Full Sequence |
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| Protein Sequence Length: 1010 Download |
| MAQLAPSSHC YIRKPSRQAS ASPSRHACLN CEHRDNRGWA FPKGMQTAPI VVAPPAITPY 60 APDPGSAGAA GDARVSPSVP AVPAAVPVAA VCTEEDVSKE TEGLGRGLPE QSSSAAQFSL 120 SRSSPLAGGR LDVVHWREGR MLRIWTPPGF SPTSSSPSSS RDPLPVLYLN DGQNLYGDQP 180 TLSGCSWHVG EAAAGLINSG ALPPFVVVGI DHAGDKRSYD YLPYRPGTAN GYRLDAANWP 240 GGGVEAYLRA VVDEILPYTE RTYGVSSEPA LRGFGGSSFG GICALCAAML HPGVFGALLV 300 ESPSLWFGEE RLLRQDLPSF QGPWPARMFL AMGTKEYSGI RKETLTPEFD SRLVSLTHDL 360 AALLESRGLM RGERLQLVIE EGATHTEAAW AGRLPAALSS LGLHWWRHVL SRCRDHLYFT 420 FPRKLLAGRP AVLFFNQARS TALASRPRDS IKMSYGFNVD WSVGGGRIDM TPAVGLTALA 480 AETRVGRATN GTSPLPAYDI VGDVAEAFHA ADASSWLQAT FTVPPEAYEM HMAFSDGDNG 540 NWDNNDGANF YARVKMDMTA EQRSHTVEQA MAEGPAWGDV QEIAHKRSGS MYFTTPEFLV 600 AGEPAVLYVN RHRVRGLEHS PNMRVHFGFN SWQVGGQEMC LKPSSLWRGE YTDWWSVPLT 660 VPGDATDMSF ALTDGHGVWD NNFGNNYMCP VKKARGTGGL VERRVEPRGV ESEESMPHAA 720 GTLHIVTLTK RKGGDTAVRA NKWTEEKRVR VWTPPGFDPS RPPPGGYPVL YMQDGQNMFE 780 DWLAHQGVSW RVGYTASDLI TRGELPPFVV VAVDSVGAMR SLNYLPYPPG TGAGGFRGDA 840 ERWPGGGLEA YMGRLVEEIM PLIQQRFAVS SDPAKVAFGG GSFAGVAALY AAMHYPHVFG 900 CVLAESPSLW IAEGRFLQDM RMYRGMLPER LFLGCGTKEY SATRDHDRED VDALLLSYCQ 960 EAASILESQG MRGNRLRFLV EEGAGHHELA WQWRLTGAMR FLFSAWWDE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03423 | CBM_25 | 2.0e-13 | 602 | 692 | 95 | + Carbohydrate binding domain (family 25). | ||
| COG2382 | Fes | 5.0e-14 | 704 | 1005 | 304 | + Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | ||
| COG2819 | COG2819 | 2.0e-14 | 767 | 1006 | 248 | + Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | ||
| COG2382 | Fes | 1.0e-14 | 166 | 369 | 204 | + Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism] | ||
| COG2819 | COG2819 | 5.0e-20 | 166 | 398 | 242 | + Predicted hydrolase of the alpha/beta superfamily [General function prediction only] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:2001070 | starch binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001693877.1 | 0 | 118 | 482 | 94 | 454 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_001693877.1 | 0 | 136 | 406 | 827 | 1091 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_001693877.1 | 0.000004 | 418 | 595 | 678 | 811 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_001693877.1 | 0 | 499 | 1009 | 582 | 1093 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | XP_001693877.1 | 0 | 715 | 1007 | 99 | 378 | predicted protein [Chlamydomonas reinhardtii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3c8h_D | 0.00000006 | 797 | 910 | 219 | 312 | A Chain A, 2.0 Angstrom Crystal Structure Of Glutamate--Cysteine Ligase (Gsha) Ftom Francisella Tularensis In Complex With Amp |
| PDB | 3c8h_C | 0.00000006 | 797 | 910 | 219 | 312 | A Chain A, 2.0 Angstrom Crystal Structure Of Glutamate--Cysteine Ligase (Gsha) Ftom Francisella Tularensis In Complex With Amp |
| PDB | 3c8h_B | 0.00000006 | 797 | 910 | 219 | 312 | A Chain A, 2.0 Angstrom Crystal Structure Of Glutamate--Cysteine Ligase (Gsha) Ftom Francisella Tularensis In Complex With Amp |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO599168 | 229 | 748 | 973 | 0 |
| FD891587 | 165 | 125 | 289 | 0 |
| HO599168 | 200 | 169 | 367 | 6.02558e-44 |
| FD891587 | 155 | 743 | 893 | 2e-28 |
| HO599168 | 45 | 960 | 1004 | 0.000001 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Chlamydomonas reinhardtii | g14415.t1.169.432 | g14415.t1.169.432 | |||
| Ricinus communis | 37836.m000013 | 50435.m000014 | |||
| Volvox carteri | Vocar20002384m | Vocar20002241m.140.404 | Vocar20002241m.140.404 | ||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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