| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20002632m |
| Family | CBM53 |
| Protein Properties | Length: 1261 Molecular Weight: 139377 Isoelectric Point: 6.6851 |
| Chromosome | Chromosome/Scaffold: 2 Start: 617128 End: 628629 |
| Description | starch synthase 3 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM53 | 313 | 404 | 1.1e-23 |
| APMKLYFNRNQSEKLRHRPHIVLQYGYNHWELVPETGNRAELMPAPLPKNDTMDFWSCTVQVPEETFEVNFILHDNNGLYENNNGMDFTYDV | |||
| CBM53 | 688 | 777 | 7.6e-33 |
| GSEVTVFYNPRDTPLNGRQQIYLMGGWNRWTHKRHFGPIAMHRPVDGGEHWQATLTVPKDAFKMDFVFADVPGGDGTYDNRGGFDYHLPV | |||
| GT5 | 789 | 1254 | 0 |
| VCHIAVEMAPIAKVGGGGGGDGTGYMVGGLGDVVTALGRAVKEQGHTVEVVLPRYDFFLHSPVLKDQLRYETEFDWGGTRIYVTTAVVENVRVFFIEPKN GFFATPTVYGRYDDEVRFDFFCKAALEFLLKTGRQPDILHCHDWSTAHVAQSYWSDYHPYGLFKPRVVFTIHNLNYGQKKIGEAAHSCQKFTTVSPTYAF EVGGHPVIGPHAHKFMGIRNGIDPELWSPEENQFLPVCYSSDNVEDGKKAARQALRQRLGLTTWNDKFIVAVVSRLTGQKGVPLIKHAAFRAVDRGGQFV LLGSAPDPKVQADFNALAGQMGGQDAAFCFKYDEPLSHLIYAAADMVVVPSMFEPCGLTQMIAMRYGAVPVVRHTGGLRDTVFDVDFDKERAAWELYGSS DWQRDGIDATNGFAFSGTDGGALDYALNRAIDAWYNDRAWFRGLQKRVMEQDWSWNRPAIDYIELY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1261 Download |
| MASSMGHMGL LGSAGAHRFV RKGGDGVIRR RGSCGVRQRQ APSLKGLRKE DAELLKQAEY 60 MSAEEQAELR RLLEENHKLR EVVTSSAKHM SPQQLERFTR EYNSLATQAA QAGVAVEAGM 120 KQVATSAASQ GTASLRSSSS TSSNSASAGG RLEATASASS GGNGAIGYSG SSREYAREMA 180 SMSVELDSSL EDDHEEQQQT QHGGSGLEKQ VVPAASTRTE PFAAAASRFE ALLSERRPAG 240 VVNAVQAQLM DAREAPPPPS GAAQHDPAAE AARKASLRAA AAAEVESHDP RAVVAGREHW 300 MIITVPEKPV AGAPMKLYFN RNQSEKLRHR PHIVLQYGYN HWELVPETGN RAELMPAPLP 360 KNDTMDFWSC TVQVPEETFE VNFILHDNNG LYENNNGMDF TYDVEAGITY DIWIDTAAER 420 AVAKELARKE AEAKAAEEAK RQAAELMAQQ AKEFGKRKAE DLKNNISQLQ DGAVTVLFRS 480 GVPVYRVLPT NPVAGGKVRL QYNRMSGPFG KFPIPEEQTI TMLYGFNGWQ SSGKAAMTRV 540 PPPASAAVTG PIAARGFLAR QLLLAVVGAN GTRLEEDWFE TEVALPKEAV AMNFVFNYYE 600 HYDNNSRQDY KVKVVLPPGL SIDTWADQVA EQLREKEYQR RVEEQRAAEE KARRAEEKKK 660 AAQDFVKAVE RRKVRHVLFT DPEVVTAGSE VTVFYNPRDT PLNGRQQIYL MGGWNRWTHK 720 RHFGPIAMHR PVDGGEHWQA TLTVPKDAFK MDFVFADVPG GDGTYDNRGG FDYHLPVEGS 780 PVREPPLYVC HIAVEMAPIA KVGGGGGGDG TGYMVGGLGD VVTALGRAVK EQGHTVEVVL 840 PRYDFFLHSP VLKDQLRYET EFDWGGTRIY VTTAVVENVR VFFIEPKNGF FATPTVYGRY 900 DDEVRFDFFC KAALEFLLKT GRQPDILHCH DWSTAHVAQS YWSDYHPYGL FKPRVVFTIH 960 NLNYGQKKIG EAAHSCQKFT TVSPTYAFEV GGHPVIGPHA HKFMGIRNGI DPELWSPEEN 1020 QFLPVCYSSD NVEDGKKAAR QALRQRLGLT TWNDKFIVAV VSRLTGQKGV PLIKHAAFRA 1080 VDRGGQFVLL GSAPDPKVQA DFNALAGQMG GQDAAFCFKY DEPLSHLIYA AADMVVVPSM 1140 FEPCGLTQMI AMRYGAVPVV RHTGGLRDTV FDVDFDKERA AWELYGSSDW QRDGIDATNG 1200 FAFSGTDGGA LDYALNRAID AWYNDRAWFR GLQKRVMEQD WSWNRPAIDY IELYFSALKS 1260 * 1320 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 2.0e-12 | 678 | 780 | 103 | + synthase/transferase | ||
| PRK00654 | glgA | 4.0e-139 | 787 | 1260 | 513 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-158 | 789 | 1256 | 510 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02316 | PLN02316 | 0 | 306 | 1259 | 976 | + synthase/transferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| GO:2001070 | starch binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY42381.1 | 0 | 165 | 1260 | 182 | 1242 | soluble starch synthase III [Chlamydomonas reinhardtii] |
| RefSeq | XP_001695327.1 | 7e-20 | 1 | 240 | 1 | 171 | soluble starch synthase III [Chlamydomonas reinhardtii] |
| RefSeq | XP_001695327.1 | 0 | 305 | 739 | 164 | 541 | soluble starch synthase III [Chlamydomonas reinhardtii] |
| RefSeq | XP_001695327.1 | 0.001 | 520 | 777 | 190 | 416 | soluble starch synthase III [Chlamydomonas reinhardtii] |
| RefSeq | XP_001695327.1 | 0 | 810 | 1260 | 537 | 987 | soluble starch synthase III [Chlamydomonas reinhardtii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 789 | 1255 | 3 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 789 | 1255 | 3 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 789 | 1255 | 3 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 789 | 1255 | 3 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 789 | 1255 | 3 | 474 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794758 | 588 | 675 | 1259 | 0 |
| HO417650 | 442 | 821 | 1259 | 0 |
| HO651392 | 426 | 837 | 1259 | 0 |
| BI995362 | 206 | 877 | 1082 | 0 |
| HO778003 | 737 | 315 | 1037 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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