| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20003880m |
| Family | GT5 |
| Protein Properties | Length: 1127 Molecular Weight: 118208 Isoelectric Point: 8.5463 |
| Chromosome | Chromosome/Scaffold: 37 Start: 708147 End: 717064 |
| Description | Glycogen/starch synthases, ADP-glucose type |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 572 | 781 | 0 |
| VFVTAEAAPWSKTGGLGDVMGSLPRALAARGHRVMVVSPRYLSPATEERYAGLTNTGVRATLDLGPPQSGGGGSHEVGFFHTHKDGVDWVFVDHMSYHRD GTPYGNAYGTYGDNLFRFALLCLAACEAPLLLHIGGHRRGTPPGLPYGQDVTFIANDWHAGLVPVYLAAKYRRHGVFKNARCVLALHNLAHQGAHPPNCF SSLGLPPDWY | |||
| GT5 | 823 | 964 | 0 |
| SLGGKGLCKAALQGALGLPVDPAAPLLGFIGRLDYQKGPDLVLQALPRLVAAGCQVVLLGSGAPDYEEAFRAAAAAFPANVRAHVGFSVPLSHRIVAASD ILLMPSRFEPCGLNQLYAMRYGTVPVAHGTGGLLDTIDDVKP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1127 Download |
| MDLVRSPALL SARELRRMGS SECARRASRN APRLVSYANW FQQQSTQAVT GDENSDAPAR 60 VSRPVVSTSA EEDFMRRARK MERRIAKLKR LQERLSQLKE ESDLMQAYAE ASADSDSDAE 120 DAPLRAPAAS ASAEELRQWV AALVAKSAAR AANAGQQGRG GSSTAATSSS NSSSSVSSTN 180 GASSGSSIYR QSGSGGWQGD SGARPMPPPQ QPQQQQRQPS APPPTPGAPT MPPWGQATAT 240 ATATGPPRQA GSSSSTKDST TTTTTASTTT TSSTASTGAG SGGIGAVRRY TVRYSSSSPR 300 PQMVQLPSPG GQQPASAAAP VTSNAVLAAA PAEAEAAKPT AKASLLETPP PLPPPPLAQW 360 RQQPHAGSTS APPGPPVARP QGSQTAVSAA TVMAENAPLA GPGPTTANWR TAASTSSPSP 420 SPSKPSSSSS SSPSPSEPFY SVGAMSNETQ RLSQPQPPQK QKQPSTTSTA AGSAAPSTPA 480 AVPVPVPVPS PPRDPKAELR TTIFPESLTS TNPYTLYDMP LPPLPLRESW QTPAERRRAD 540 AAATAPRSGG GGAAAAAATA ATALAERPRD LVFVTAEAAP WSKTGGLGDV MGSLPRALAA 600 RGHRVMVVSP RYLSPATEER YAGLTNTGVR ATLDLGPPQS GGGGSHEVGF FHTHKDGVDW 660 VFVDHMSYHR DGTPYGNAYG TYGDNLFRFA LLCLAACEAP LLLHIGGHRR GTPPGLPYGQ 720 DVTFIANDWH AGLVPVYLAA KYRRHGVFKN ARCVLALHNL AHQGAHPPNC FSSLGLPPDW 780 YGALEWVLTP GAGGSGGGGH ERKPTINILK VRQAHTARGI IGSLGGKGLC KAALQGALGL 840 PVDPAAPLLG FIGRLDYQKG PDLVLQALPR LVAAGCQVVL LGSGAPDYEE AFRAAAAAFP 900 ANVRAHVGFS VPLSHRIVAA SDILLMPSRF EPCGLNQLYA MRYGTVPVAH GTGGLLDTID 960 DVKPFWGEPA RKEEEDLDEL FASGLSWGRR TASRSADDPS TNNAEYYQPF QDYFGSSGRY 1020 GPVDEYDDDN EYGSEYDDDD SDLPAWRRGL GLGRSRDPGT GWTFAPATAE AMLDSVTAAL 1080 AVYEHHPDKW RRIQLAGMRR DFSWERAARQ WEAVLEGAHV AAAYCK* 1140 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK00654 | glgA | 3.0e-11 | 1059 | 1114 | 56 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 4.0e-14 | 1057 | 1118 | 62 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-60 | 821 | 968 | 148 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PRK00654 | glgA | 4.0e-91 | 572 | 968 | 450 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 3.0e-102 | 572 | 968 | 439 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAN37578.1 | 0 | 570 | 972 | 135 | 575 | soluble starch synthase I [Colocasia esculenta] |
| GenBank | AAN37578.1 | 0.0001 | 1059 | 1126 | 576 | 643 | soluble starch synthase I [Colocasia esculenta] |
| DDBJ | BAD18845.1 | 0 | 569 | 965 | 136 | 571 | starch synthase I precursor [Phaseolus vulgaris] |
| DDBJ | BAD18845.1 | 0.000000004 | 1055 | 1125 | 575 | 645 | starch synthase I precursor [Phaseolus vulgaris] |
| RefSeq | NP_001104892.1 | 0 | 563 | 965 | 126 | 566 | plastid starch synthase I precursor [Zea mays] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 570 | 959 | 11 | 440 | A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg |
| PDB | 3vue_A | 0 | 570 | 959 | 11 | 440 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 1rzv_B | 2e-36 | 570 | 961 | 2 | 406 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 2e-36 | 570 | 961 | 2 | 406 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO595058 | 435 | 586 | 965 | 0 |
| HO581986 | 382 | 684 | 998 | 0 |
| HO595058 | 58 | 1059 | 1116 | 0.000002 |
| HO581986 | 20 | 1097 | 1116 | 5.8 |
| HO581986 | 34 | 1059 | 1091 | 5.8 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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