| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20006355m |
| Family | GT5 |
| Protein Properties | Length: 747 Molecular Weight: 81578.1 Isoelectric Point: 7.1188 |
| Chromosome | Chromosome/Scaffold: 7 Start: 138488 End: 147167 |
| Description | starch synthase 4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 282 | 456 | 0 |
| NVVHVASELAPIAKVGGLADVVSSLAKAHQMSGLLTEVILPKYDCIQYGDVHELRQMCELAVPWGPEPGRVVKAVVWSGCVEGLPVYFVEPHCPERYFWR GKFYGEPDDAARFCFFSRAALEFLAQRQHEAPDVIHCHDWQAAAVGPLLKETYRASGLSRTRAVLTIHNMAFQGA | |||
| GT5 | 611 | 741 | 0 |
| GSDVRVVLRHDDALSHRIFAGADLLLVPSLFEPCGLTQLIALRYGTVPVVRETGGLADTIRDVAHSGAPEPERNGFTFVAPEETAVTTALRRAIAAYRDG REWWATELVPRVMRQDWSWSQSAERYRDIYN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 747 Download |
| MQQRTLASRG CLLANTRLAV PALSRRHDSL SSSRRSKVLS FAATHVLARP DVQPAVELSI 60 SPGDVLATPD AVVQVAISQP TYAVHVLYRS RGGPLEGASC VWAHIGHSGW RDTRDVRLSN 120 IGPDGNSHEE VWQGTYQVPV GRLSAPWHLE VQMVFKGRVG GLGGHPHNHP WPGEGEERWD 180 NNGGSNWVVA VELAPGGEKL VPALDSNSAA TRALTSSLLL RLEALVASRL LTPEQGSVLR 240 MLAWQHDLST VKAFQSVRHL DDKSVAGALA GRCAWLRPPG LNVVHVASEL APIAKVGGLA 300 DVVSSLAKAH QMSGLLTEVI LPKYDCIQYG DVHELRQMCE LAVPWGPEPG RVVKAVVWSG 360 CVEGLPVYFV EPHCPERYFW RGKFYGEPDD AARFCFFSRA ALEFLAQRQH EAPDVIHCHD 420 WQAAAVGPLL KETYRASGLS RTRAVLTIHN MAFQGAIVYC DRITTVSPTY AREVLRDEPH 480 LGCGLQAVMR RHTHKLEGVL NGLDYETWNP ATDPYISAHY APDDISGKRT CKAALCKELG 540 LPFDGITTNG NNGNNNGNAN ANHHHHDTAH NGHDNNGNSS NGHGCWGPNG RPLVAVVQRE 600 WEALSREVAA GSDVRVVLRH DDALSHRIFA GADLLLVPSL FEPCGLTQLI ALRYGTVPVV 660 RETGGLADTI RDVAHSGAPE PERNGFTFVA PEETAVTTAL RRAIAAYRDG REWWATELVP 720 RVMRQDWSWS QSAERYRDIY NTAIGL* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 4.0e-50 | 614 | 740 | 127 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PRK00654 | glgA | 8.0e-92 | 281 | 542 | 297 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 5.0e-95 | 282 | 542 | 300 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| COG0297 | GlgA | 7.0e-112 | 282 | 740 | 499 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PLN02939 | PLN02939 | 5.0e-145 | 237 | 744 | 544 | + transferase, transferring glycosyl groups | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACY56261.1 | 0 | 206 | 745 | 351 | 913 | soluble starch synthase IV-2 [Oryza sativa Indica Group] |
| EMBL | CAB40375.1 | 0 | 216 | 744 | 312 | 865 | starch synthase, isoform V [Vigna unguiculata] |
| RefSeq | XP_001701486.1 | 0 | 153 | 744 | 1 | 644 | soluble starch synthase [Chlamydomonas reinhardtii] |
| RefSeq | XP_001751723.1 | 0 | 216 | 744 | 275 | 830 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002298514.1 | 0 | 216 | 745 | 325 | 879 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 281 | 740 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 281 | 740 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 281 | 740 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 281 | 740 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 281 | 740 | 1 | 473 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO651392 | 441 | 318 | 743 | 0 |
| CB893818 | 286 | 280 | 528 | 0 |
| BM001041 | 211 | 386 | 543 | 0 |
| HO417650 | 455 | 302 | 744 | 0 |
| GO851132 | 341 | 358 | 662 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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