| Basic Information | |
|---|---|
| Species | Volvox carteri |
| Cazyme ID | Vocar20012425m |
| Family | CE11 |
| Protein Properties | Length: 654 Molecular Weight: 70685.1 Isoelectric Point: 4.0514 |
| Chromosome | Chromosome/Scaffold: 32 Start: 158307 End: 164678 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE11 | 242 | 538 | 0 |
| GEVYVPASCGFVYEANPITTTVARGNFQVAGVESLLSALEACGVDNARIEIEGGDELPVLDGSAEGWTDEICRAGLRYAPTRPDLTVALPPGALGGLGPG GEGEEGGSTAGARGGEGQGEEEGEEGVRQGGVAAEGRPVPKLVLRPQSVVSVVRGSSFVTLYPEDTFRITAGLDRHREAPVIGKQWLTWCMFEDVHYKHA LSGARGFVSSPEQAMGMRDAGWLMGGTEGVMLIALDDRWYDPDLVRHADEPARRQIQDLIGDLSLLARDGHSGLPCGHIVSYNADHELNVAFVEKLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 654 Download |
| MAHQLLRRPV LGCRAPAALP CPAQIAVTRT ACNRLPIVLR ISSPLRPQQS TVNRRVIPQT 60 PCLAAAESEV ADPMERPRSR FLFDTSPEII DSPDAPELPM PSEYQQTLWT SFALAGIGLH 120 TGEYACVRVR PAFAGEGRYF VRVAEGTNAP RAMAGADMDL QEEIMEDIST EEGLLNDPEY 180 RQELVTAYQE YVDAQEEEGF GGSFVDYLQA QEYTDLVQRL EEQGPPKFPF SQAEEPQPRD 240 EGEVYVPASC GFVYEANPIT TTVARGNFQV AGVESLLSAL EACGVDNARI EIEGGDELPV 300 LDGSAEGWTD EICRAGLRYA PTRPDLTVAL PPGALGGLGP GGEGEEGGST AGARGGEGQG 360 EEEGEEGVRQ GGVAAEGRPV PKLVLRPQSV VSVVRGSSFV TLYPEDTFRI TAGLDRHREA 420 PVIGKQWLTW CMFEDVHYKH ALSGARGFVS SPEQAMGMRD AGWLMGGTEG VMLIALDDRW 480 YDPDLVRHAD EPARRQIQDL IGDLSLLARD GHSGLPCGHI VSYNADHELN VAFVEKLLES 540 TRQDGDHGDW VPIRNVAGPS LPVELSELMS DVIAEPGELG AGEEDEEEEE EEGAAAAGEY 600 DEADEEEVDE YGEAGEFEEY EDEEGVVDVE ATEVEDPRKR RGGGGGGGGM GRR* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0774 | LpxC | 9.0e-6 | 104 | 143 | 40 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| COG0774 | LpxC | 2.0e-12 | 244 | 318 | 75 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| pfam03331 | LpxC | 8.0e-14 | 242 | 318 | 77 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| pfam03331 | LpxC | 6.0e-19 | 404 | 542 | 141 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| COG0774 | LpxC | 2.0e-19 | 404 | 542 | 142 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAL53384.1 | 0 | 98 | 551 | 672 | 1040 | DDX20_HUMAN Probable ATP-dependent RNA helicase DDX20 (ISS) [Ostreococcus tauri] |
| RefSeq | XP_001418401.1 | 0.0001 | 105 | 168 | 1 | 63 | predicted protein [Ostreococcus lucimarinus CCE9901] |
| RefSeq | XP_001418401.1 | 3e-35 | 265 | 530 | 60 | 271 | predicted protein [Ostreococcus lucimarinus CCE9901] |
| RefSeq | XP_001698142.1 | 0 | 75 | 502 | 74 | 444 | hypothetical protein CHLREDRAFT_177090 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001712863.1 | 0 | 98 | 539 | 19 | 399 | hypothetical protein BNATCHR284 [Bigelowiella natans] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3uhm_A | 0.000002 | 235 | 318 | 29 | 120 | A Chain A, Crystal Structure Of A Mycobacterial Protein |
| PDB | 3uhm_A | 0.0007 | 382 | 546 | 126 | 279 | A Chain A, Crystal Structure Of A Mycobacterial Protein |
| PDB | 3u1y_B | 0.000002 | 235 | 318 | 29 | 120 | A Chain A, Crystal Structure Of A Mycobacterial Protein |
| PDB | 3u1y_B | 0.0007 | 382 | 546 | 126 | 279 | A Chain A, Crystal Structure Of A Mycobacterial Protein |
| PDB | 3u1y_A | 0.000002 | 235 | 318 | 29 | 120 | A Chain A, Crystal Structure Of A Mycobacterial Protein |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FD877830 | 194 | 380 | 573 | 0 |
| FD877829 | 71 | 503 | 573 | 6e-39 |
| DR572655 | 139 | 403 | 540 | 4e-22 |
| CO483882 | 139 | 403 | 540 | 4e-22 |
| GE252752 | 143 | 401 | 537 | 5e-22 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |