CAZyme Information

Basic Information
SpeciesVolvox carteri
Cazyme IDVocar20013124m
FamilyGH20
Protein PropertiesLength: 887 Molecular Weight: 94627.7 Isoelectric Point: 9.3641
ChromosomeChromosome/Scaffold: 30 Start: 1422926 End: 1432603
Descriptionbeta-hexosaminidase 3
View CDS
External Links
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH202193008.1e-23
  DWPRFTHRGLLVDTARHFLPLSVLHTTLDAMAANKLNVLHWHATDDQSFPMEALVASEGGAVSDLATRGSFGDRMLYSREEV
Full Sequence
Protein Sequence     Length: 887     Download
MSGLVLALVA LCAGVVTASA SLKTFAGIWP QPRSQRPVAT FYVGQHTGSL TTRHAATTAY    60
KAAVKPPSLA RGRHQGSRQY GRTPALTCAS RFYMVSIFPL LVLLVALFLP GSVPDLCFCQ    120
GQSPTPSSPG PKIVLQVDNQ DAQLGPAMDE SYQIQVPGRG SRGTRGEVLI QAATQVGAVH    180
ALETLAQLVV SYDHVKQQQP QQQLEGPGPL WLLAGNISDW PRFTHRGLLV DTARHFLPLS    240
VLHTTLDAMA ANKLNVLHWH ATDDQSFPME ALVASEGGAV SDLATRGSFG DRMLYSREEV    300
AGRPRTRRWV PYWVLLRRCS PIRSFTRGEM KLTWTAGGAT LLYGSGWSHT GLAGRSYSAL    360
IRTCCRSLTS PTAAHSLVVR LFPTCRTAVL PLLAAAYYMS RVLRGIVNGG SDSGGGSRGP    420
PRTPVVWQEA FDVAGGTGLP PGTIVQVWQS DVGPVGRTKI TAATGLVGGA SHGAGAAARA    480
ASGGEGVDLA SFDHNHGHMD LDDSDPNPYL DPYGDLGLED EEELMELLEA GEIAQEVAAG    540
RQLLFMEGLL GLLRRKEEPA VVAGGVGAVR GGGGGGGGGG GFDGGAEEAG GPRKRKKMKK    600
MKKMKKMKKM KKRAPGGGGR GGGGLGGGVG LRGGGGAHHA VGAGYDDADN DLYRRLRLGR    660
RLRYYQGKHE DDGVEYLQPY LHPVVRGIGR GTPSSSSSSS SSSSPSATAA AQQQQQQQQH    720
HHHHHHQDPD PELRSELQRL REAVAAADGA PGGGSSGSSA SRRTQAEELA AVTAAGFQAI    780
LSSGWYLDWI SWGEDWRRFY SQEPLGFEGS EEQKARVLGG EACMWGEYVD ATNLISRTWP    840
RASAVAERLW SDAAVRDEEE AGQRLRVHRC RMVRRRAEKR GECEGR* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02742GH20_hexosaminidase1.0e-1422530076+
cd02742GH20_hexosaminidase2.0e-2276685188+
cd06562GH20_HexA_HexB-like3.0e-2622330179+
cd06562GH20_HexA_HexB-like2.0e-38764863107+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563beta-N-acetylhexosaminidase activity
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankABQ22431.13.00004e-4176787576184beta-hexosaminidase beta chain precursor-like protein [Callithrix jacchus]
GenBankEDM10130.19.80909e-4576887593200rCG44661, isoform CRA_a [Rattus norvegicus]
GenBankEFB14981.14.99997e-41770875335440hypothetical protein PANDA_005458 [Ailuropoda melanoleuca]
RefSeqXP_001513475.17e-24133473146473PREDICTED: similar to PSP94-like protein [Ornithorhynchus anatinus]
RefSeqXP_001513475.11.99993e-41766875446555PREDICTED: similar to PSP94-like protein [Ornithorhynchus anatinus]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2gk1_H5e-39767875382490B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
PDB2gk1_H1e-2614146389390B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
PDB2gk1_F5e-39767875382490B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
PDB2gk1_F1e-2614146389390B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
PDB2gk1_D5e-39767875382490B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
Transmembrane Domains
StartEnd
426
92114
Signal Peptide
Cleavage Site
18
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
FC096560897638519e-39
FG189234937628541e-28
EE014128857678518e-28
DY980195967688631e-27
HO564519917678572e-27
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_022_00071.4Aquca_022_00071.3Aquca_022_00071.2Aquca_022_00071.1Aquca_010_00682.1
Aquca_004_00645.1
Arabidopsis lyrata475658485946470561
Arabidopsis thalianaAT1G65590.1AT3G55260.1AT1G05590.1
Brachypodium distachyonBradi2g57420.1Bradi2g25310.1Bradi2g37460.1Bradi3g44607.1Bradi1g69660.1
Bradi1g23740.1
Brassica rapaBra004121Bra014765Bra032460
Carica papayaevm.model.supercontig_197.26
Capsella rubellaCarubv10020116mCarubv10016974mCarubv10011603m
Chlamydomonas reinhardtiig11709.t1
Citrus clementinaCiclev10014808mCiclev10031174mCiclev10031139mCiclev10031669mCiclev10033772m
Ciclev10019509mCiclev10024601m
Citrus sinensisorange1.1g008945morange1.1g013337morange1.1g008821morange1.1g014971morange1.1g044344m
orange1.1g007722morange1.1g007610m
Cucumis sativusCucsa.165600.1Cucsa.178740.1Cucsa.165600.2.144.314Cucsa.165600.2.144.314Cucsa.177460.1
Cucsa.165600.2.312.421Cucsa.165600.2.312.421
Eucalyptus grandisEucgr.G02896.1Eucgr.L01476.1Eucgr.K02799.2Eucgr.K02799.1Eucgr.K02799.3
Eucgr.K02798.2Eucgr.K02798.1
Fragaria vescamrna26730.1-v1.0-hybridmrna02330.1-v1.0-hybrid
Glycine maxGlyma18g52290.1Glyma02g10570.1Glyma10g43710.1Glyma20g38400.1Glyma08g17200.1
Glyma08g16970.1Glyma15g41986.1
Gossypium raimondiiGorai.002G136400.2Gorai.002G136400.1Gorai.011G246500.1Gorai.012G068200.1Gorai.012G068200.2
Gorai.002G136400.3Gorai.012G068200.3Gorai.007G264000.1
Linum usitatissimumLus10003292Lus10030323Lus10022251Lus10030348Lus10007899
Malus domesticaMDP0000798095MDP0000262060.270.444MDP0000262060.270.444MDP0000564236MDP0000262060.174.257
MDP0000262060.174.257
Manihot esculentacassava4.1_033827mcassava4.1_033064mcassava4.1_004406mcassava4.1_007813mcassava4.1_023099m
cassava4.1_021615m
Medicago truncatulaMedtr2g062560.1
Mimulus guttatusmgv1a004365mmgv1a003720mmgv1a007861mmgv1a003512mmgv1a023788m
Oryza sativaLOC_Os01g66700.1LOC_Os05g34320.2LOC_Os05g34320.1LOC_Os05g02510.1LOC_Os05g34320.3
LOC_Os07g38790.1LOC_Os03g11980.1
Panicum virgatumPavirv00023753mPavirv00005093mPavirv00062644mPavirv00067910mPavirv00063863m
Pavirv00062646mPavirv00001875mPavirv00056279mPavirv00062645m.258.396Pavirv00062645m.258.396
Pavirv00060770mPavirv00016511mPavirv00054866mPavirv00049460mPavirv00062645m.174.254
Pavirv00062645m.174.254
Physcomitrella patensPp1s70_132V6.1Pp1s3_199V6.1
Phaseolus vulgarisPhvul.008G015400.1Phvul.007G010100.1Phvul.005G045300.1Phvul.005G043200.1
Picea abiesMA_177334g0010MA_271570g0010MA_92690g0010.179.289MA_92690g0010.179.289MA_92690g0010.297.429
MA_92690g0010.297.429
Populus trichocarpaPotri.008G079400.2Potri.008G079400.1Potri.010G211000.2Potri.010G211000.1Potri.010G211000.4
Potri.010G211000.3Potri.008G079400.5Potri.008G079400.3Potri.008G079400.4Potri.001G232800.1
Potri.001G232600.1
Prunus persicappa003880mppa002753m
Ricinus communis29929.m00450328180.m00037729616.m00021628180.m00037634575.m000024
47890.m000013
Setaria italicaSi001028mSi021738mSi024695mSi021693mSi029311m
Si034794m
Selaginella moellendorffii117332429308422139422155445016
422160429325441789422260
Sorghum bicolorSb09g020420.2Sb09g020420.1Sb09g001670.1Sb02g037280.1Sb01g042640.1
Thellungiella halophilaThhalv10018379mThhalv10010264mThhalv10007181mThhalv10007179m
Vitis viniferaGSVIVT01016639001GSVIVT01006264001GSVIVT01004010001GSVIVT01006000001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)