Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_1.407 |
Family | CBM43 |
Protein Properties | Length: 445 Molecular Weight: 48820.1 Isoelectric Point: 9.6834 |
Chromosome | Chromosome/Scaffold: 1 Start: 5014494 End: 5016638 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 360 | 441 | 3.2e-34 |
WCVPKPQANNAQLQANIDYVCSQGIDCRPIQPGGICFNPNTLAAHAAYAMNSFYQLRGHAAHTCDFSGTGLLTAADPSSGSC | |||
GH17 | 27 | 338 | 0 |
IGVNYGTFGNLPSPTQVANFLKTQTIIDSIKIFDVNSDILRAFANTGITVTVTVPNNLIPALVNVREARRWVAANIAPFHPQTRINRISVGNEVLLTLDN NLISNLVPAMRSLHRALMRSGIRDIQVTSAHALNIIAFDLTASPSSVRFRPGWDVGVLAPMLQFLRQTRSPLMVNPYPYFGFDPNNVNYAIFRPNRGIRD RFTGHVYKNSYDALIDGTYSAMKALGYGDVGLVIGETGWPSACDQWFCSPEIAAGFNKNVIWRATRQGTPLLPRKRFETYIFALFNEELKPGPTAERNWG LFRPDFSPVYDV |
Full Sequence |
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Protein Sequence Length: 445 Download |
MAATRICTIL ILFATVFLHL SATISAIGVN YGTFGNLPSP TQVANFLKTQ TIIDSIKIFD 60 VNSDILRAFA NTGITVTVTV PNNLIPALVN VREARRWVAA NIAPFHPQTR INRISVGNEV 120 LLTLDNNLIS NLVPAMRSLH RALMRSGIRD IQVTSAHALN IIAFDLTASP SSVRFRPGWD 180 VGVLAPMLQF LRQTRSPLMV NPYPYFGFDP NNVNYAIFRP NRGIRDRFTG HVYKNSYDAL 240 IDGTYSAMKA LGYGDVGLVI GETGWPSACD QWFCSPEIAA GFNKNVIWRA TRQGTPLLPR 300 KRFETYIFAL FNEELKPGPT AERNWGLFRP DFSPVYDVGI MRNGGGGGHV RPRPLPGKKW 360 CVPKPQANNA QLQANIDYVC SQGIDCRPIQ PGGICFNPNT LAAHAAYAMN SFYQLRGHAA 420 HTCDFSGTGL LTAADPSSGS CRYI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.004 | 23 | 331 | 326 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-25 | 359 | 429 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-44 | 359 | 443 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-72 | 27 | 338 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK76666.1 | 0 | 30 | 443 | 32 | 449 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
GenBank | AAM66982.1 | 0 | 30 | 443 | 32 | 449 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_191103.1 | 0 | 30 | 443 | 32 | 449 | glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative [Arabidopsis thaliana] |
RefSeq | XP_002312098.1 | 0 | 23 | 444 | 26 | 454 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530863.1 | 0 | 10 | 444 | 10 | 457 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 1.4013e-45 | 27 | 338 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 1.4013e-45 | 27 | 338 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghr_A | 9.94922e-44 | 27 | 338 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aq0_B | 9.94922e-44 | 27 | 338 | 1 | 304 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 9.94922e-44 | 27 | 338 | 1 | 304 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |