| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_111.8 |
| Family | GT47 |
| Protein Properties | Length: 351 Molecular Weight: 39391.1 Isoelectric Point: 8.305 |
| Chromosome | Chromosome/Scaffold: 111 Start: 280039 End: 282197 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 14 | 331 | 0 |
| PLKVFMYDLPPDFHFGLLGWKGKPNQTWPNVNNPDDIPPYPGGLNLQHSMEYWLTMDLLASNISTARPCSIIRVKNSSQANVVFVPFFSSVSYNRHSKLH RDQNISLDSYLQNKLVEFLMSQDEWKRLGGKDHLIVAHHPNSMLQARKKLGSAMFVLADFGRYPTEIANLQKDIIAPYKHIVKTISAGQSAPFHKRPILA YFQGAIYRKDGGIIRQELYYLLKDEKDVHFAFGTVQGKGVSQASRGMGSAKFCLHIAGDTPSSNRLFDAIVSHCVPVIISDDIELPFEDVLDYSEFCIFI RASDAVKNGYILNLLRGI | |||
| Full Sequence |
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| Protein Sequence Length: 351 Download |
| MPSTGQNMNN AYAPLKVFMY DLPPDFHFGL LGWKGKPNQT WPNVNNPDDI PPYPGGLNLQ 60 HSMEYWLTMD LLASNISTAR PCSIIRVKNS SQANVVFVPF FSSVSYNRHS KLHRDQNISL 120 DSYLQNKLVE FLMSQDEWKR LGGKDHLIVA HHPNSMLQAR KKLGSAMFVL ADFGRYPTEI 180 ANLQKDIIAP YKHIVKTISA GQSAPFHKRP ILAYFQGAIY RKDGGIIRQE LYYLLKDEKD 240 VHFAFGTVQG KGVSQASRGM GSAKFCLHIA GDTPSSNRLF DAIVSHCVPV IISDDIELPF 300 EDVLDYSEFC IFIRASDAVK NGYILNLLRG ISKGQWDQDV EKIDGSFTTL * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 2.0e-50 | 13 | 331 | 328 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD55303.1 | 0 | 15 | 347 | 72 | 410 | AC008263_34 F25A4.34 [Arabidopsis thaliana] |
| RefSeq | XP_002284930.1 | 0 | 1 | 343 | 55 | 402 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002284932.1 | 0 | 1 | 343 | 16 | 363 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002320639.1 | 0 | 15 | 343 | 3 | 329 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514760.1 | 0 | 1 | 343 | 94 | 441 | catalytic, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EY669441 | 270 | 52 | 320 | 0 |
| FG607579 | 255 | 85 | 338 | 0 |
| ES825864 | 262 | 4 | 264 | 0 |
| DV152455 | 228 | 116 | 343 | 0 |
| ES825864 | 71 | 251 | 319 | 0.0002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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