| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_160.18 |
| Family | CBM22 |
| Protein Properties | Length: 771 Molecular Weight: 86764.1 Isoelectric Point: 7.3615 |
| Chromosome | Chromosome/Scaffold: 160 Start: 317726 End: 321034 |
| Description | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM22 | 53 | 191 | 2.4e-27 |
| IIPNPRFDDGLNNWSCKGCKLALHESMVDGKVLPLQGKFFASASERTESWNGIEQEITGRLQRKLAYEVSVVVRVYGDNINVIISAGVQVTLWIQTPDDR ELYVHIANVQATDKSWVKLQGKFLLNSSPSRAVIFLEGP | |||
| CBM22 | 226 | 368 | 4.9e-37 |
| NIVENSNLDQSTNGWFPLGGCTLSIGTGSPVELPSMARHSLGPHQPLSGRYIIVTNRTDTWMGPAQMINEKLKLYLTYQVSAWVRIGPRESTGRQVVNVA LGMDGQWVNGGQVECHDERWYEIGGSFRIEKQPSNVMVYVQGP | |||
| GH10 | 423 | 706 | 0 |
| KVRQSQNSFPLGSCISRTSLDNEDFTDFLVKNFNWVVFGNELKWSWTEPRQGSFNYKDADELLDFCKNNNLEIRGHCIYWEMEYSIQSWVQALNKDDLMI AVQNHLTQLLTRYKGKFRHYDVDNEMLHGSFYLDRLGKDIRPNMFKTAHQLDPSATLFVNDYHIEDGSDIRSSPEKYIQQILDLQEQGAPVGGIGIQGHT DFPVGPIVASALDKLATLGLPIWFTELDVSSANEFIRADDLEVMLREAFAHPAVEGIILWGFWELHMSRGNAHLVNAEGKINEA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 771 Download |
| MELLFFSLIF HTVLLVIQLG PVVGTIPDPN RQALSRIHVG NQRKSRNHAK DDIIPNPRFD 60 DGLNNWSCKG CKLALHESMV DGKVLPLQGK FFASASERTE SWNGIEQEIT GRLQRKLAYE 120 VSVVVRVYGD NINVIISAGV QVTLWIQTPD DRELYVHIAN VQATDKSWVK LQGKFLLNSS 180 PSRAVIFLEG PPPGVDILVN SFIAKHADKM ARLSRPIIEK AVFGVNIVEN SNLDQSTNGW 240 FPLGGCTLSI GTGSPVELPS MARHSLGPHQ PLSGRYIIVT NRTDTWMGPA QMINEKLKLY 300 LTYQVSAWVR IGPRESTGRQ VVNVALGMDG QWVNGGQVEC HDERWYEIGG SFRIEKQPSN 360 VMVYVQGPAS GVDLMVAGLQ IFPVDRKARF KYLRSKTDKI RKRDVILKFS GSKGGSSLGK 420 LVKVRQSQNS FPLGSCISRT SLDNEDFTDF LVKNFNWVVF GNELKWSWTE PRQGSFNYKD 480 ADELLDFCKN NNLEIRGHCI YWEMEYSIQS WVQALNKDDL MIAVQNHLTQ LLTRYKGKFR 540 HYDVDNEMLH GSFYLDRLGK DIRPNMFKTA HQLDPSATLF VNDYHIEDGS DIRSSPEKYI 600 QQILDLQEQG APVGGIGIQG HTDFPVGPIV ASALDKLATL GLPIWFTELD VSSANEFIRA 660 DDLEVMLREA FAHPAVEGII LWGFWELHMS RGNAHLVNAE GKINEAGKRF LALKKEWLSH 720 AKGSMDEQGE FRFRGFHGTY NLEISSDVMK LNKTFVVDRG DSRMIIPIDL * 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 7.0e-12 | 225 | 371 | 154 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| pfam02018 | CBM_4_9 | 4.0e-14 | 52 | 193 | 144 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| COG3693 | XynA | 3.0e-38 | 425 | 684 | 285 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
| smart00633 | Glyco_10 | 3.0e-80 | 464 | 710 | 268 | + Glycosyl hydrolase family 10. | ||
| pfam00331 | Glyco_hydro_10 | 4.0e-81 | 429 | 714 | 306 | + Glycosyl hydrolase family 10. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002283550.1 | 0 | 51 | 770 | 266 | 981 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301133.1 | 0 | 41 | 770 | 324 | 1049 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002301133.1 | 0 | 51 | 381 | 1 | 314 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510024.1 | 0 | 43 | 770 | 103 | 827 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002510024.1 | 0.000002 | 202 | 381 | 89 | 262 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1i1x_A | 4e-37 | 413 | 683 | 1 | 268 | A Chain A, Arabidopsis Thaliana Peroxidase N |
| PDB | 1i1w_A | 4e-37 | 413 | 683 | 1 | 268 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
| PDB | 2bnj_A | 1e-36 | 413 | 683 | 1 | 268 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
| PDB | 1k6a_A | 5e-36 | 413 | 683 | 1 | 268 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |
| PDB | 1xyz_B | 6e-36 | 433 | 684 | 39 | 307 | A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| EX570690 | 295 | 477 | 771 | 0 |
| EX570691 | 281 | 477 | 757 | 0 |
| EL428755 | 280 | 431 | 710 | 0 |
| HO789518 | 275 | 470 | 744 | 0 |
| EB442796 | 299 | 253 | 551 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
