y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_166.29 |
Family | GH3 |
Protein Properties | Length: 325 Molecular Weight: 35750.4 Isoelectric Point: 4.8554 |
Chromosome | Chromosome/Scaffold: 166 Start: 240089 End: 241531 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 70 | 320 | 0 |
VPRLGLPKYEWWNEALHGVSSVGGGSRFDTVVPGATSFPTVILSTASFNEDLWKRIGQVVSNEARAMYNLGRAGLTFWSPVINVVRDPRWGRTQETPGED PFVVGRYAANFVRGLQDVRGTEHIPDLNARPLKVSACCKHYAAYDVDNWKGVDRLHFDARVTEQDMVETFLKPFEMCVKEGDVSSIMCSYNRVNGIPTCA DPKLLNQTVRGDWGLRGYLVSDCDSIEVMVDNHQFINDTNEDAVAQTLKAG |
Full Sequence |
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Protein Sequence Length: 325 Download |
MSNEASATAP EQPPFTYVCD PAHLSAVKLD VSTLGFCDKS LPYSVRVEDL VDQLSVEEKV 60 LLLGSTSPGV PRLGLPKYEW WNEALHGVSS VGGGSRFDTV VPGATSFPTV ILSTASFNED 120 LWKRIGQVVS NEARAMYNLG RAGLTFWSPV INVVRDPRWG RTQETPGEDP FVVGRYAANF 180 VRGLQDVRGT EHIPDLNARP LKVSACCKHY AAYDVDNWKG VDRLHFDARV TEQDMVETFL 240 KPFEMCVKEG DVSSIMCSYN RVNGIPTCAD PKLLNQTVRG DWGLRGYLVS DCDSIEVMVD 300 NHQFINDTNE DAVAQTLKAG KLSL* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 6.0e-25 | 97 | 320 | 229 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-42 | 68 | 320 | 258 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-59 | 68 | 320 | 254 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PLN03080 | PLN03080 | 6.0e-116 | 4 | 320 | 318 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25988.1 | 0 | 15 | 320 | 46 | 351 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274591.1 | 0 | 15 | 320 | 45 | 350 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 6 | 320 | 40 | 354 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309869.1 | 0 | 49 | 305 | 2 | 258 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519718.1 | 0 | 10 | 320 | 42 | 351 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4i3g_B | 2e-26 | 43 | 291 | 50 | 274 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 4i3g_A | 2e-26 | 43 | 291 | 50 | 274 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 2x41_A | 2e-24 | 46 | 323 | 3 | 289 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 2x40_A | 2e-24 | 46 | 323 | 3 | 289 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol |
PDB | 2x42_A | 1e-23 | 46 | 290 | 3 | 241 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BX837031 | 306 | 16 | 320 | 0 |
BX838810 | 306 | 16 | 320 | 0 |
DT564937 | 306 | 7 | 312 | 0 |
DT547178 | 304 | 7 | 310 | 0 |
DY932965 | 287 | 34 | 320 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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