| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_23.144 |
| Family | CBM43 |
| Protein Properties | Length: 488 Molecular Weight: 53778.5 Isoelectric Point: 4.7071 |
| Chromosome | Chromosome/Scaffold: 23 Start: 2220163 End: 2222572 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 370 | 451 | 2.8e-27 |
| WCVLNPHVDDELDELPKSIDYACTLSDCTALGYGSSCNHLSMQGNASYAFNMYYQVNNQKSWDCDFSGLAMITDDDPSDEKC | |||
| GH17 | 10 | 347 | 0 |
| VGVNWGTMASHQLPPDKVVNMLVENGIGKLKLFEADERIMEALIGTSIEVMVAIPNLMLKQFSHDPRAAISWVDANVTSYCYPGGVNIKLDNISLHCSQH LTKATMYVAVGNEPFLQAYNGSFIHLTLPALKNIQQALIDAGLGSKVKATVPFNADIYNSPASNPVPSAGDFRPEIRELSIQIIQYLYSNDAPFTVNIYP FLSLYSNDNFPINFAFFDGTSKPVRDGDLLYTNVFDANLDTLVWALDKAGYPDMKIVVGEVGWPTDGDKHANIQNAQRFNQGLLRHVLSGVGTPARKGTI DVYIFSLIDEIAKSVAPGSFERHWGIFDYDGKPKYELD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 488 Download |
| MAALSQGSSV GVNWGTMASH QLPPDKVVNM LVENGIGKLK LFEADERIME ALIGTSIEVM 60 VAIPNLMLKQ FSHDPRAAIS WVDANVTSYC YPGGVNIKLD NISLHCSQHL TKATMYVAVG 120 NEPFLQAYNG SFIHLTLPAL KNIQQALIDA GLGSKVKATV PFNADIYNSP ASNPVPSAGD 180 FRPEIRELSI QIIQYLYSND APFTVNIYPF LSLYSNDNFP INFAFFDGTS KPVRDGDLLY 240 TNVFDANLDT LVWALDKAGY PDMKIVVGEV GWPTDGDKHA NIQNAQRFNQ GLLRHVLSGV 300 GTPARKGTID VYIFSLIDEI AKSVAPGSFE RHWGIFDYDG KPKYELDLAG LQQGKFLVPV 360 EGVNYMTRRW CVLNPHVDDE LDELPKSIDY ACTLSDCTAL GYGSSCNHLS MQGNASYAFN 420 MYYQVNNQKS WDCDFSGLAM ITDDDPSDEK CLFPIMIAFG SSTLLLRGFL IVLLRVIEGL 480 MVFLLIL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 1.0e-5 | 265 | 339 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 6.0e-18 | 369 | 440 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-31 | 370 | 453 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-75 | 10 | 347 | 342 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28113.1 | 0 | 1 | 477 | 538 | 973 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189076.1 | 0 | 3 | 486 | 32 | 497 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002281500.1 | 0 | 1 | 487 | 20 | 485 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324967.1 | 0 | 8 | 467 | 7 | 449 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515573.1 | 0 | 1 | 487 | 21 | 489 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 10 | 348 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 2.8026e-45 | 10 | 348 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 2.8026e-45 | 10 | 348 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 2.8026e-45 | 10 | 348 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 2.8026e-45 | 10 | 348 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
