Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_62.143 |
Family | CBM43 |
Protein Properties | Length: 452 Molecular Weight: 48576.2 Isoelectric Point: 4.704 |
Chromosome | Chromosome/Scaffold: 62 Start: 896986 End: 898969 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 362 | 444 | 1.9e-32 |
WCVPRAGVSDAELQASLDYACSQQSIDCSPIQAGGKCFEPNTVASHAAFAMNLYYQTAGQNPWNCDFSQTATLTSQNPSYNDC | |||
GH17 | 29 | 345 | 0 |
IGVNYGQVADNLPPPSATAKLLQSTSIEKVRLYGADPAIIQALANTGIGIVIGAANGDIPALASDPNSAAQWVQSNVLPYYPASKIILITVGNEVMMTND QNLINQLLPAMQNVRKALEANSLGGKIKVSTVHSMALLSLSDPPSSGFFIPSYQNTLKGLLQFLKDTESPFAINPYPFFAYQSDPRPETLAFCLFQPNAG RVDAGSGIKYMNMFDAQIDAVYSALRAIGFKEVEILVAETGWPWQGDSNEVGPSRENAKAYNGNLIAHLRSMVGTPLMPGKSVDTYIFALYDEDLKPGPA SERAFGLFRTDLSMAYD |
Full Sequence |
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Protein Sequence Length: 452 Download |
MASRFLPFLL LLLLLLLPPL PFSRSESFIG VNYGQVADNL PPPSATAKLL QSTSIEKVRL 60 YGADPAIIQA LANTGIGIVI GAANGDIPAL ASDPNSAAQW VQSNVLPYYP ASKIILITVG 120 NEVMMTNDQN LINQLLPAMQ NVRKALEANS LGGKIKVSTV HSMALLSLSD PPSSGFFIPS 180 YQNTLKGLLQ FLKDTESPFA INPYPFFAYQ SDPRPETLAF CLFQPNAGRV DAGSGIKYMN 240 MFDAQIDAVY SALRAIGFKE VEILVAETGW PWQGDSNEVG PSRENAKAYN GNLIAHLRSM 300 VGTPLMPGKS VDTYIFALYD EDLKPGPASE RAFGLFRTDL SMAYDAGLSK SNTTLKPSST 360 VWCVPRAGVS DAELQASLDY ACSQQSIDCS PIQAGGKCFE PNTVASHAAF AMNLYYQTAG 420 QNPWNCDFSQ TATLTSQNPS YNDCVYPGAS T* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-8 | 27 | 339 | 325 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-21 | 362 | 433 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-38 | 362 | 446 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-95 | 29 | 345 | 317 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95331.1 | 0 | 6 | 450 | 1 | 455 | unknown [Populus trichocarpa] |
GenBank | ABK95837.1 | 0 | 6 | 451 | 1 | 452 | unknown [Populus trichocarpa] |
EMBL | CBI32582.1 | 0 | 25 | 449 | 55 | 490 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002284340.1 | 0 | 25 | 449 | 55 | 490 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509479.1 | 0 | 22 | 451 | 21 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 29 | 336 | 1 | 300 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 29 | 345 | 1 | 303 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 29 | 345 | 1 | 303 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 29 | 344 | 3 | 310 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 29 | 344 | 3 | 310 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO781349 | 414 | 47 | 449 | 0 |
HO796302 | 419 | 42 | 449 | 0 |
HO782823 | 442 | 36 | 452 | 0 |
EX255941 | 299 | 152 | 450 | 0 |
CO073972 | 292 | 33 | 324 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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