| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_8.110 |
| Family | CBM43 |
| Protein Properties | Length: 463 Molecular Weight: 51117.5 Isoelectric Point: 9.4097 |
| Chromosome | Chromosome/Scaffold: 8 Start: 724559 End: 726143 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 373 | 456 | 1.4e-27 |
| WCVAAKGANTSELASALTYACSQGNKTCEALQRGRACHKPDSVIWHASYAFSSYWAQFKKSGGSCYFNGLATQTIKDPSYGSCK | |||
| GH17 | 24 | 345 | 0 |
| VGVNYGELGNNLPSPAQSVELIKSLKASRVKIYGANPDILNALKNTEMQVSIMVPNEIIVNVSKSQAFSDNWVQNNVVPHYPRTKIRYLLVGNEILTDGA PETRSNLVPAMRRIKNSLKTHGIRKVKVGTSLAMDVLESSFPPSNGTFRSDIALPIMKPMLQFLNRTKSFLFVDVYPYFAWATQPQNIDLNYALLESTNI TITDPVSNLTYHNLFDQMIDALIFAMKRLGYPNIRVFLAETGWPNGGDFDQIGANIYNAATYNRNVINKLTARPPVGTPARPGSVLPAFIFALYNENQKP GPGTERHFGLLYPSGSYIYEID | |||
| Full Sequence |
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| Protein Sequence Length: 463 Download |
| MDVVPLFILF LFISLSTAEI SSKVGVNYGE LGNNLPSPAQ SVELIKSLKA SRVKIYGANP 60 DILNALKNTE MQVSIMVPNE IIVNVSKSQA FSDNWVQNNV VPHYPRTKIR YLLVGNEILT 120 DGAPETRSNL VPAMRRIKNS LKTHGIRKVK VGTSLAMDVL ESSFPPSNGT FRSDIALPIM 180 KPMLQFLNRT KSFLFVDVYP YFAWATQPQN IDLNYALLES TNITITDPVS NLTYHNLFDQ 240 MIDALIFAMK RLGYPNIRVF LAETGWPNGG DFDQIGANIY NAATYNRNVI NKLTARPPVG 300 TPARPGSVLP AFIFALYNEN QKPGPGTERH FGLLYPSGSY IYEIDLSGQT AKSEYKRPLP 360 SPDNNEPYKG KIWCVAAKGA NTSELASALT YACSQGNKTC EALQRGRACH KPDSVIWHAS 420 YAFSSYWAQF KKSGGSCYFN GLATQTIKDP SYGSCKFPSV TL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 7.0e-17 | 373 | 444 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 5.0e-35 | 373 | 457 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-110 | 24 | 345 | 323 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65039.1 | 0 | 13 | 462 | 14 | 460 | putative glucan endo-1-3-beta-glucosidase [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 6 | 462 | 11 | 467 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_683538.1 | 0 | 13 | 462 | 14 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002303070.1 | 0 | 3 | 462 | 2 | 461 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002334812.1 | 0 | 1 | 462 | 4 | 465 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 24 | 346 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 24 | 346 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 24 | 346 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghr_A | 0 | 24 | 346 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1aq0_B | 0 | 24 | 346 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX291357 | 356 | 99 | 453 | 0 |
| EX279500 | 314 | 99 | 412 | 0 |
| DT572251 | 302 | 108 | 409 | 0 |
| EX279500 | 19 | 416 | 434 | 0.00000007 |
| EX279500 | 15 | 401 | 415 | 0.00000007 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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