Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_91.73 |
Family | CBM43 |
Protein Properties | Length: 480 Molecular Weight: 52439.6 Isoelectric Point: 5.9192 |
Chromosome | Chromosome/Scaffold: 91 Start: 817305 End: 821377 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 360 | 441 | 6.4e-25 |
WCVMKNSARLDDPQIAPSVNYACGLADCTSLGYGTACGNLDAQGNISYAFNSYYQINNQLDSACKFPNVSMITKTDPSVGTC | |||
GH17 | 20 | 338 | 0 |
IGANWGTQATHPLPPETVVRLLRENGFQKAKLFDAEYDTLRALSKSGIEVMVGIPNDMLASIAGSMKAAEKWVAKNVSAHITNNNVNIRYVAVGNEPFLQ TYNGTFLGTTFPALRNIQSALIKAGLSNQVKVTCPLNADVYWSSTGFPSGGDFRADIHDLMFAIVKFLSENGAPFTVNIYPFISLYTDANFPVEYAFFDG NSQPLNDGGTLYYNMFDANHDTLVYALQKNGFGDLPIIVGEIGWPTDGDRNANMEYARRFNQGFMSHISGGKGTPKRPGPIDAYLFSLIDEDAKSIQPGN FERHWGIFTFDGIPKYPLN |
Full Sequence |
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Protein Sequence Length: 480 Download |
MGWFWVTVGL LSMVCTVSGI GANWGTQATH PLPPETVVRL LRENGFQKAK LFDAEYDTLR 60 ALSKSGIEVM VGIPNDMLAS IAGSMKAAEK WVAKNVSAHI TNNNVNIRYV AVGNEPFLQT 120 YNGTFLGTTF PALRNIQSAL IKAGLSNQVK VTCPLNADVY WSSTGFPSGG DFRADIHDLM 180 FAIVKFLSEN GAPFTVNIYP FISLYTDANF PVEYAFFDGN SQPLNDGGTL YYNMFDANHD 240 TLVYALQKNG FGDLPIIVGE IGWPTDGDRN ANMEYARRFN QGFMSHISGG KGTPKRPGPI 300 DAYLFSLIDE DAKSIQPGNF ERHWGIFTFD GIPKYPLNLG TTNSGALVPA RNVKYLEKKW 360 CVMKNSARLD DPQIAPSVNY ACGLADCTSL GYGTACGNLD AQGNISYAFN SYYQINNQLD 420 SACKFPNVSM ITKTDPSVGT CRFEIMIEPY YYGSAAETGV ALRLLHLVAG LVLFLLAVQ* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0002 | 252 | 330 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 7.0e-14 | 359 | 425 | 74 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-29 | 359 | 443 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-77 | 20 | 338 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL24251.1 | 0 | 18 | 469 | 20 | 471 | AT5g58090/k21l19_70 [Arabidopsis thaliana] |
EMBL | CBI38945.1 | 0 | 1 | 478 | 1 | 482 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_200617.2 | 0 | 18 | 469 | 20 | 471 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002331390.1 | 0 | 8 | 453 | 2 | 448 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530371.1 | 0 | 1 | 478 | 1 | 481 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 20 | 339 | 3 | 314 | A Chain A, Crystal Structure Of The Legionella Pneumophila Gap Domain Of Lepb In Complex With Rab1b Bound To Gdp And Bef3 |
PDB | 3ur8_A | 0 | 20 | 339 | 3 | 314 | A Chain A, Crystal Structure Of The Legionella Pneumophila Gap Domain Of Lepb In Complex With Rab1b Bound To Gdp And Bef3 |
PDB | 3ur7_B | 0 | 20 | 339 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 20 | 339 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 1ghr_A | 0 | 20 | 339 | 1 | 306 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |